John W. Drake

Articles in Scholarly Journals [Incomplete List]

  1. Mutations in clusters and showers
    Proceedings of the National Academy of Sciences, vol. 104, no. 20, pp. 8203–8204, 2007
  2. The Roles of Tyr391 and Tyr619 in RB69 DNA Polymerase Replication Fidelity
    Journal of Molecular Biology, vol. 368, no. 1, pp. 18–29, 2007
  3. Biochemistry, vol. 45, no. 7, pp. 2211–2220, 2006
  4. A Role for Replication Repair in the Genesis of Templated Mutations
    Journal of Molecular Biology, vol. 358, no. 4, pp. 963–973, 2006
  5. Clusters of mutations from transient hypermutability
    Proceedings of the National Academy of Sciences, vol. 102, no. 36, pp. 12849–12854, 2005
  6. Processivity Clamp gp45 and ssDNA-Binding-Protein gp32 Modulate the Fidelity of Bacteriophage RB69 DNA Polymerase in a Sequence-Specific Manner, Sometimes Enhancing and Sometimes Compromising Accuracy
    Genetics, vol. 169, no. 4, pp. 1815–1824, 2005
  7. On the Mutation Rate of Herpes Simplex Virus Type 1
    Genetics, vol. 170, no. 2, pp. 969–970, 2005
  8. UvsX Recombinase and Dda Helicase Rescue Stalled Bacteriophage T4 DNA Replication Forks in Vitro
    Journal of Biological Chemistry, vol. 279, no. 34, pp. 35735–35740, 2004
  9. Genome-Wide Patterns of Nucleotide Substitution Reveal Stringent Functional Constraints on the Protein Sequences of Thermophiles
    Genetics, vol. 167, no. 3, pp. 1507–1512, 2004
  10. Properties of Bacteriophage T4 Proteins Deficient in Replication Repair
    Journal of Biological Chemistry, vol. 278, no. 27, pp. 25247–25255, 2003
  11. Characterization of DNA synthesis catalyzed by bacteriophage T4 replication complexes reconstituted on synthetic circular substrates
    Nucleic Acids Research, vol. 30, no. 20, pp. 4387–4397, 2002
  12. Interacting Fidelity Defects in the Replicative DNA Polymerase of Bacteriophage RB69
    Journal of Biological Chemistry, vol. 276, no. 13, pp. 10387–10397, 2001
  13. Genetic fidelity under harsh conditions: Analysis of spontaneous mutation in the thermoacidophilic archaeon Sulfolobus acidocaldarius
    Proceedings of the National Academy of Sciences, vol. 98, no. 14, pp. 7928–7933, 2001
  14. Conditional Coupling of Leading-strand and Lagging-strand DNA Synthesis at Bacteriophage T4 Replication Forks
    Journal of Biological Chemistry, vol. 276, no. 31, pp. 29559–29566, 2001
  15. The Distribution of Rates of Spontaneous Mutation over Viruses, Prokaryotes, and Eukaryotes
    Annals of the New York Academy of Sciences, vol. 870, no. 1 MOLECULAR STR, pp. 100–107, 1999
  16. Mutation rates among RNA viruses
    Proceedings of the National Academy of Sciences, vol. 96, no. 24, pp. 13910–13913, 1999
  17. Retention of replication fidelity by a DNA polymerase functioning in a distantly related environment
    Proceedings of the National Academy of Sciences, vol. 94, no. 15, pp. 8042–8046, 1997
  18. The antievolutionary component of antimutagenesis and anticarcinogenesis: where do mutation rates come from and where are they going?
    Mutation Research/Fundamental and Molecular Mechanisms of Mutagenesis, vol. 350, no. 1, pp. 5–8, 1996
  19. Looking backward on a century of mutation research
    Environmental and Molecular Mutagenesis, vol. 23, no. S2, pp. 11–14, 1994
  20. Rates of Spontaneous Mutation Among RNA Viruses
    Proceedings of the National Academy of Sciences, vol. 90, no. 9, pp. 4171–4175, 1993
  21. General Antimutators are Improbable
    Journal of Molecular Biology, vol. 229, no. 1, pp. 8–13, 1993
  22. Roots: Mutation Rates
    BioEssays, vol. 14, no. 2, pp. 137–140, 1992
  23. Duplication-Targeted DNA Methylation and Mutagenesis in the Evolution of Eukaryotic Chromosomes
    Proceedings of the National Academy of Sciences, vol. 89, no. 3, pp. 1075–1079, 1992
  24. A Constant Rate of Spontaneous Mutation in DNA-Based Microbes
    Proceedings of the National Academy of Sciences, vol. 88, no. 16, pp. 7160–7164, 1991
  25. Ernst Freese (1925–1990)
    Mutation Research/Fundamental and Molecular Mechanisms of Mutagenesis, vol. 251, no. 2, pp. 165–169, 1991
  26. Isolation and genetic characterization of newuvsW alleles of bacteriophage T4
    MGG Molecular & General Genetics, vol. 222, no. 2-3, pp. 257–264, 1990
  27. Mechanisms of Mutagenesis
    Environmental and Molecular Mutagenesis, vol. 14, no. S16, pp. 11–15, 1989
  28. Bacteriophage T4 DNA polymerase determines the amount and specificity of ultraviolet mutagenesis
    MGG Molecular & General Genetics, vol. 214, no. 3, pp. 547–552, 1988
  29. Clone size distributions of mutations induced by ethyl methanesulfonate in bacteriophage T4*1
    Journal of Molecular Biology, vol. 202, no. 1, pp. 11–16, 1988
  30. Modulation of mutation rates in bacteriophage T4 by a base-pair change a dozen nucleotides removed
    Journal of Molecular Biology, vol. 176, no. 2, pp. 239–249, 1984
  31. Bacteriophage T4 particles are refractory to bisulfite mutagenesis
    Mutation Research/Fundamental and Molecular Mechanisms of Mutagenesis, vol. 129, no. 2, pp. 149–152, 1984
  32. Determination of mutation rates in bacteriophage T4 by unneighborly base pairs: Genetic analysis*1
    Journal of Molecular Biology, vol. 143, no. 3, pp. 303–315, 1980
  33. Heat Mutagenesis in Bacteriophage T4: The Transversion Pathway
    Proceedings of the National Academy of Sciences, vol. 73, no. 11, pp. 4159–4163, 1976
  34. Heat Mutagenesis in Bacteriophage T4: The Transition Pathway
    Proceedings of the National Academy of Sciences, vol. 73, no. 4, pp. 1269–1273, 1976
  35. Environmental mutagenesis: Evolving strategies in the USA
    Mutation Research/Fundamental and Molecular Mechanisms of Mutagenesis, vol. 33, no. 1, pp. 65–72, 1975
  36. Is bacteriophage T4 DNA polymerase involved in the repair of ultraviolet damage?
    Virology, vol. 59, no. 2, pp. 580–583, 1974
  37. The invariance of mutation rates in bacteriophage T4 as functions of medium pH
    Mutation Research/Fundamental and Molecular Mechanisms of Mutagenesis, vol. 20, no. 2, pp. 271–273, 1973
  38. A genetic assay for transversion mutations in bacteriophage T4
    MGG Molecular & General Genetics, vol. 118, no. 1, pp. 1–10, 1972
  39. Bacteriophage T4 transformation: An assay for mutations induced in vitro*1
    Virology, vol. 49, no. 2, pp. 462–474, 1972
  40. Suppression of Chemical Mutagenesis in Bacteriophage T4 by Genetically Modified DNA Polymerases
    Proceedings of the National Academy of Sciences, vol. 66, no. 3, pp. 823–829, 1970
  41. Spontaneous Mutation: Genetic Control of Mutation Rates in Bacteriophage T4
    Nature, vol. 221, no. 5186, Article ID 2211128a0, 4 pages, 1969
  42. Spontaneous Mutation: Comparative Rates of Spontaneous Mutation
    Nature, vol. 221, no. 5186, Article ID 2211132a0, 1 pages, 1969
  43. Spontaneous Mutations Accumulating in Bacteriophage T4 in the Complete Absence of DNA Replication
    Proceedings of the National Academy of Sciences, vol. 55, no. 4, pp. 738–743, 1966