Jeffrey Bennetzen

Personal Home Page

http://www.genetics.uga.edu/people_bio_bennetzen.html

Articles in Scholarly Journals [Incomplete List]

  1. Fine mapping of the Pc locus of Sorghum bicolor, a gene controlling the reaction to a fungal pathogen and its host-selective toxin
    Theoretical and Applied Genetics, vol. 114, no. 6, pp. 961–970, 2007
  2. Patterns in grass genome evolution
    Current Opinion in Plant Biology, vol. 10, no. 2, pp. 176–181, 2007
  3. Plant centromere organization: a dynamic structure with conserved functions
    Trends in Genetics, vol. 23, no. 3, pp. 134–139, 2007
  4. A GeneTrek analysis of the maize genome
    Proceedings of the National Academy of Sciences, vol. 104, no. 28, pp. 11844–11849, 2007
  5. Geographical Distribution and Diversity of Bacteria Associated with Natural Populations of Drosophila melanogaster
    Applied and Environmental Microbiology, vol. 73, no. 11, pp. 3470–3479, 2007
  6. Evolutionary History and Positional Shift of a Rice Centromere
    Genetics, vol. 177, no. 2, pp. 1217–1220, 2007
  7. The TIGR Maize Database
    Nucleic Acids Research, vol. 34, no. 90001, pp. D771–D776, 2006
  8. Promoter mutations of an essential gene for pollen development result in disease resistance in rice
    Genes & Development, vol. 20, no. 10, pp. 1250–1255, 2006
  9. Uneven chromosome contraction and expansion in the maize genome
    Genome Research, vol. 16, no. 10, pp. 1241–1251, 2006
  10. Recombination, rearrangement, reshuffling, and divergence in a centromeric region of rice
    Proceedings of the National Academy of Sciences, vol. 103, no. 2, pp. 383–388, 2006
  11. Eukaryotic Transposable Elements and Genome Evolution Special Feature: Analysis of retrotransposon structural diversity uncovers properties and propensities in angiosperm genome evolution
    Proceedings of the National Academy of Sciences, vol. 103, no. 47, pp. 17638–17643, 2006
  12. Identification of stress-responsive genes in an indica rice (Oryza sativa L.) using ESTs generated from drought-stressed seedlings
    Journal of Experimental Botany, vol. 58, no. 2, pp. 253–265, 2006
  13. The maize genome as a model for efficient sequence analysis of large plant genomes
    Current Opinion in Plant Biology, vol. 9, no. 2, pp. 149–156, 2006
  14. The genetic map of finger millet, Eleusine coracana
    Theoretical and Applied Genetics, vol. 114, no. 2, pp. 321–332, 2006
  15. Targeting xa13, a recessive gene for bacterial blight resistance in rice
    Theoretical and Applied Genetics, vol. 112, no. 3, pp. 455–461, 2005
  16. Transposable elements, gene creation and genome rearrangement in flowering plants
    Current Opinion in Genetics & Development, vol. 15, no. 6, pp. 621–627, 2005
  17. Mechanisms of Recent Genome Size Variation in Flowering Plants
    Annals of Botany, vol. 95, no. 1, pp. 127–132, 2005
  18. Analysis and mapping of randomly chosen bacterial artificial chromosome clones from hexaploid bread wheat
    Proceedings of the National Academy of Sciences, vol. 102, no. 52, pp. 19243–19248, 2005
  19. Gene enrichment in maize with hypomethylated partial restriction (HMPR) libraries
    Genome Research, vol. 15, no. 10, pp. 1441–1446, 2005
  20. Structure and Evolution of the r/b Chromosomal Regions in Rice, Maize and Sorghum
    Genetics, vol. 169, no. 2, pp. 891–906, 2005
  21. DNA Rearrangement in Orthologous Orp Regions of the Maize, Rice and Sorghum Genomes
    Genetics, vol. 170, no. 3, pp. 1209–1220, 2005
  22. A Workshop Report on Wheat Genome Sequencing: International Genome Research on Wheat Consortium
    Genetics, vol. 168, no. 2, pp. 1087–1096, 2004
  23. The Wheat VRN2 Gene Is a Flowering Repressor Down-Regulated by Vernalization
    Science, vol. 303, no. 5664, pp. 1640–1644, 2004
  24. Analyses of LTR-Retrotransposon Structures Reveal Recent and Rapid Genomic DNA Loss in Rice
    Genome Research, vol. 14, no. 5, pp. 860–869, 2004
  25. Close Split of Sorghum and Maize Genome Progenitors
    Genome Research, vol. 14, no. 10a, pp. 1916–1923, 2004
  26. Gene Loss and Movement in the Maize Genome
    Genome Research, vol. 14, no. 10a, pp. 1924–1931, 2004
  27. INAUGURAL ARTICLES: Rapid recent growth and divergence of rice nuclear genomes
    Proceedings of the National Academy of Sciences, vol. 101, no. 34, pp. 12404–12410, 2004
  28. Consistent over-estimation of gene number in complex plant genomes
    Current Opinion in Plant Biology, vol. 7, no. 6, pp. 732–736, 2004
  29. Isolation and characterization of genomic and transcribed retrotransposon sequences from sorghum
    Molecular Genetics and Genomics, vol. 271, no. 3, pp. 308–316, 2004
  30. On the tetraploid origin of the maize genome
    Comparative and Functional Genomics, vol. 5, no. 3, pp. 281–284, 2004
  31. High-Cot sequence analysis of the maize genome
    The Plant Journal, vol. 34, no. 2, pp. 249–255, 2003
  32. The genetic colinearity of rice and other cereals on the basis of genomic sequence analysis
    Current Opinion in Plant Biology, vol. 6, no. 2, pp. 128–133, 2003
  33. A complex history of rearrangement in an orthologous region of the maize, sorghum, and rice genomes
    Proceedings of the National Academy of Sciences, vol. 100, no. 21, pp. 12265–12270, 2003
  34. Enrichment of Gene-Coding Sequences in Maize by Genome Filtration
    Science, vol. 302, no. 5653, pp. 2118–2120, 2003
  35. Structure and evolution of the Cinful retrotransposon family of maize
    Genome, vol. 46, no. 5, pp. 745–752, 2003
  36. Novel genes are enriched in normalized cDNA libraries from drought-stressed seedlings of rice (Oryza sativa L. subsp. indica cv. Nagina 22)
    Genome, vol. 45, no. 1, pp. 204–211, 2002
  37. THE RICE GENOME: Opening the Door to Comparative Plant Biology
    Science, vol. 296, no. 5565, pp. 60–63, 2002
  38. Methylation-Spanning Linker Libraries Link Gene-Rich Regions and Identify Epigenetic Boundaries in Zea mays
    Genome Research, vol. 12, no. 9, pp. 1345–1349, 2002
  39. Genome Size Reduction through Illegitimate Recombination Counteracts Genome Expansion in Arabidopsis
    Genome Research, vol. 12, no. 7, pp. 1075–1079, 2002
  40. Structural Analysis of the Maize Rp1 Complex Reveals Numerous Sites and Unexpected Mechanisms of Local Rearrangement
    THE PLANT CELL ONLINE, vol. 14, no. 12, pp. 3213–3223, 2002
  41. Comparative Sequence Analysis of the Sorghum Rph Region and the Maize Rp1 Resistance Gene Complex
    PLANT PHYSIOLOGY, vol. 130, no. 4, pp. 1728–1738, 2002
  42. Exceptional haplotype variation in maize
    Proceedings of the National Academy of Sciences, vol. 99, no. 14, pp. 9093–9095, 2002
  43. Plant Molecular Biology, vol. 48, no. 5/6, pp. 821–827, 2002
  44. Genetica, vol. 115, no. 1, pp. 29–36, 2002
  45. Divergent perspectives on GM food
    Nature Biotechnology, vol. 20, no. 12, Article ID nbt1202-1195, 1 pages, 2002
  46. Frequent genic rearrangements in two regions of grass genomes identified by comparative sequence analysis
    Comparative and Functional Genomics, vol. 3, no. 2, pp. 165–166, 2002
  47. Genomic sequencing reveals gene content, genomic organization, and recombination relationships in barley
    Functional & Integrative Genomics, vol. 2, no. 1-2, pp. 51–59, 2002
  48. Transposable elements, genes and recombination in a 215-kb contig from wheat chromosome 5A m
    Functional & Integrative Genomics, vol. 2, no. 1-2, pp. 70–80, 2002
  49. Genetic diversity of Eritrean sorghum landraces assessed with simple sequence repeat (SSR) markers
    TAG Theoretical and Applied Genetics, vol. 105, no. 2-3, pp. 229–236, 2002
  50. Cereal genes similar to Snf2 define a new subfamily that includes human and mouse genes
    Molecular Genetics and Genomics, vol. 268, no. 4, pp. 488–499, 2002
  51. Nature Genetics, vol. 27, no. 1, pp. 3–5, 2001
  52. Chromosome Research, vol. 9, no. 4, pp. 325–337, 2001
  53. Comparative Sequence Analysis of Colinear Barley and Rice Bacterial Artificial Chromosomes
    PLANT PHYSIOLOGY, vol. 125, no. 3, pp. 1342–1353, 2001
  54. National Science Foundation-Sponsored Workshop Report. Maize Genome Sequencing Project
    PLANT PHYSIOLOGY, vol. 127, no. 4, pp. 1572–1578, 2001
  55. Genetic Evidence and the Origin of Maize
    Latin American Antiquity, vol. 12, no. 1, p. 84, 2001
  56. Structural Domains and Matrix Attachment Regions along Colinear Chromosomal Segments of Maize and Sorghum
    The Plant Cell, vol. 12, no. 2, p. 249, 2000
  57. Comparative Sequence Analysis of Plant Nuclear Genomes: Microcolinearity and Its Many Exceptions
    The Plant Cell, vol. 12, no. 7, p. 1021, 2000
  58. Structural Domains and Matrix Attachment Regions along Colinear Chromosomal Segments of Maize and Sorghum
    THE PLANT CELL ONLINE, vol. 12, no. 2, pp. 249–264, 2000
  59. Comparative Sequence Analysis of Plant Nuclear Genomes: Microcolinearity and Its Many Exceptions
    THE PLANT CELL ONLINE, vol. 12, no. 7, pp. 1021–1030, 2000
  60. Retrotransposons: central players in the structure, evolution and function of plant genomes
    Trends in Plant Science, vol. 5, no. 12, pp. 509–510, 2000
  61. Plant Molecular Biology, vol. 42, no. 1, pp. 251–269, 2000
  62. Colinearity and its exceptions in orthologous adh regions of maize and sorghum
    Proceedings of the National Academy of Sciences, vol. 96, no. 13, pp. 7409–7414, 1999
  63. Plant genomics takes root, branches out
    Trends in Genetics, vol. 15, no. 3, pp. 85–87, 1999
  64. PLANT RETROTRANSPOSONS
    Annual Review of Genetics, vol. 33, no. 1, pp. 479–532, 1999
  65. A Plant Genome Initiative
    THE PLANT CELL ONLINE, vol. 10, no. 4, pp. 488–490, 1998
  66. Matrix attachment regions and structural colinearity in the genomes of two grass species
    Nucleic Acids Research, vol. 26, no. 3, pp. 761–767, 1998
  67. A Plant Genome Initiative
    The Plant Cell, vol. 10, no. 4, p. 488, 1998
  68. Evidence that a Recent Increase in Maize Genome Size was Caused by the Massive Amplification of Intergene Retrotransposons
    Annals of Botany, vol. 82, pp. 37–44, 1998
  69. Grass genomes
    Proceedings of the National Academy of Sciences, vol. 95, no. 5, pp. 1975–1978, 1998
  70. Genome studies and molecular evolution commonalities, contrasts, continuity and change in plant genomes Editorial overview
    Current Opinion in Plant Biology, vol. 1, no. 2, pp. 101–102, 1998
  71. The structure and evolution of angiosperm nuclear genomes
    Current Opinion in Plant Biology, vol. 1, no. 2, pp. 103–108, 1998
  72. Nature Genetics, vol. 20, no. 1, pp. 43–45, 1998
  73. Microcolinearity in sh2-homologous regions of the maize, rice, and sorghum genomes
    Proceedings of the National Academy of Sciences, vol. 94, no. 7, pp. 3431–3435, 1997
  74. Do Plants Have a One-Way Ticket to Genomic Obesity?
    The Plant Cell, vol. 9, no. 9, p. 1509, 1997
  75. Identification of a Pathogenicity Locus, rpfA, in Erwinia carotovora subsp. carotovora That Encodes a Two-Component Sensor-Regulator Protein
    Molecular Plant-Microbe Interactions, vol. 10, no. 3, pp. 407–415, 1997
  76. Do Plants Have a One-Way Ticket to Genomic Obesity?
    THE PLANT CELL ONLINE, vol. 9, no. 9, pp. 1509–1514, 1997
  77. Nested Retrotransposons in the Intergenic Regions of the Maize Genome
    Science, vol. 274, no. 5288, pp. 765–768, 1996
  78. Gene identification in a complex chromosomal continuum by local genomic cross-referencing
    The Plant Journal, vol. 10, no. 6, pp. 1163–1168, 1996
  79. Sequence composition and organization in the Sh2/A1-homologous region of rice
    Plant Molecular Biology, vol. 32, no. 6, pp. 999–1001, 1996
  80. The contributions of retroelements to plant genome organization, function and evolution
    Trends in Microbiology, vol. 4, no. 9, pp. 347–353, 1996
  81. Assessment of genetic diversity in dent and popcorn (Zea mays L.) inbred lines using inter-simple sequence repeat (ISSR) amplification
    Molecular Breeding, vol. 1, no. 4, pp. 365–373, 1995
  82. The Rp3 disease resistance gene of maize: mapping and characterization of introgressed alleles
    Theoretical and Applied Genetics, vol. 91, no. 1, 1995
  83. Matrix Attachment Regions and Transcribed Sequences within a Long Chromosomal Continuum Containing Maize Adh1
    THE PLANT CELL ONLINE, vol. 7, no. 10, pp. 1667–1680, 1995
  84. Matrix Attachment Regions and Transcribed Sequences within a Long Chromosomal Continuum Containing Maize Adh1
    The Plant Cell, vol. 7, no. 10, p. 1667, 1995
  85. Integration and Nonrandom Mutation of a Plasma Membrane Proton ATPase Gene Fragment within the Bs1 Retroelement of Maize
    The Plant Cell, vol. 6, no. 8, p. 1177, 1994
  86. Integration and Nonrandom Mutation of a Plasma Membrane Proton ATPase Gene Fragment within the Bs1 Retroelement of Maize
    THE PLANT CELL ONLINE, vol. 6, no. 8, pp. 1177–1186, 1994
  87. The generation of Mutator transposable element subfamilies in maize
    Theoretical and Applied Genetics, vol. 87, no. 6, 1994
  88. Analysis of the chromosomal distribution of transposon-carrying T-DNAs in tomato using the inverse polymerase chain reaction
    MGG Molecular & General Genetics, vol. 242, no. 5, pp. 573–585, 1994
  89. DNA Class Organization on Maize Adh1 Yeast Artificial Chromosomes
    Proceedings of the National Academy of Sciences, vol. 91, no. 3, pp. 863–867, 1994
  90. Structure and evolution of the genomes ofsorghum bicolor andZea mays
    Theoretical and Applied Genetics, vol. 86, no. 5, pp. 598–604, 1993
  91. Isolation of matrices from maize leaf nuclei: identification of a matrix-binding site adjacent to theAdh1 gene
    Plant Molecular Biology, vol. 22, no. 6, pp. 1135–1143, 1993
  92. Grasses as a single genetic system: genome composition, collinearity and compatibility
    Trends in Genetics, vol. 9, no. 8, pp. 259–261, 1993
  93. The Use of Molecular Markers to Study Setosphaeria turcica Resistance in Maize
    Phytopathology, vol. 83, no. 12, p. 1326, 1993
  94. Extramarital sex amongst the beets ? Organization, instability and evolution of plant disease resistance gennes
    Plant Molecular Biology, vol. 20, no. 4, pp. 575–580, 1992
  95. Homologous recombination between plasmid DNA molecules in maize protoplasts
    MGG Molecular & General Genetics, vol. 230, no. 1-2, pp. 209–218, 1991
  96. Recombination at the Rp1 locus of maize
    MGG Molecular & General Genetics, vol. 226, no. 3, 1991
  97. Genetic Mapping and Characterization of Sorghum and Related Crops by Means of Maize DNA Probes
    Proceedings of the National Academy of Sciences, vol. 87, no. 11, pp. 4251–4255, 1990
  98. Structure and Coding Properties of Bs1, a Maize Retrovirus-Like Transposon
    Proceedings of the National Academy of Sciences, vol. 86, no. 16, pp. 6235–6239, 1989
  99. Genomic organization of the ribosomal DNA of sorghum and its close relatives
    Theoretical And Applied Genetics, vol. 77, no. 6, pp. 844–850, 1989
  100. DNA structures associated with autonomously replicating sequences from plants
    Plant Molecular Biology, vol. 12, no. 5, pp. 507–516, 1989
  101. Allele-specific and Mutator-associated instability at the Rpl disease-resistance locus of maize
    Nature, vol. 332, no. 6162, Article ID 332369a0, 1 pages, 1988
  102. Cell-Autonomous Recognition of the Rust Pathogen Determines Rp1-Specified Resistance in Maize
    Science, vol. 241, no. 4862, pp. 208–210, 1988
  103. Covalent DNA modification and the regulation of Mutator element transposition in maize
    MGG Molecular & General Genetics, vol. 208, no. 1-2, pp. 45–51, 1987
  104. Concomitant regulation of Mu1 transposition and Mutator activity in maize
    MGG Molecular & General Genetics, vol. 208, no. 1-2, pp. 57–62, 1987
  105. Selection and characterization of cadmium-resistant suspension cultures of the wild tomato Lycopersicon peruvianum
    Plant Cell Reports, vol. 3, no. 6, pp. 258–261, 1984
  106. DNA Insertion in the First Intron of Maize Adh1 Affects Message Levels: Cloning of Progenitor and Mutant Adh1 Alleles
    Proceedings of the National Academy of Sciences, vol. 81, no. 13, pp. 4125–4128, 1984
  107. Nucieotide sequence of the maize transposable element Mul
    Nucleic Acids Research, vol. 12, no. 15, pp. 5955–5967, 1984
  108. Nucleotide sequence of the maize transposable element Mul
    Nucleic Acids Research, vol. 12, no. 17, pp. 6924–6924, 1984
  109. Regulatory mutants of the maize Adh1 gene caused by DNA insertions
    Nature, vol. 300, no. 5892, Article ID 300542a0, 2 pages, 1982
  110. Single-stranded DNA transcription by yeast RNA polymerase B
    Biochimica et Biophysica Acta (BBA) - Nucleic Acids and Protein Synthesis, vol. 656, no. 2, pp. 220–227, 1981
  111. Isolation of the structural gene for alcohol dehydrogenase by genetic complementation in yeast
    Nature, vol. 283, no. 5743, Article ID 283214a0, 2 pages, 1980