Hongyun Wang

Personal Home Page

http://www.cse.ucsc.edu/~hongwang/

Articles in Scholarly Journals [Incomplete List]

  1. Stokes efficiency of molecular motors with inertia
    Applied Mathematics Letters, 2008
  2. Homogeneous flow field effect on the control of Maxwell materials
    Journal of Non-Newtonian Fluid Mechanics, vol. 150, no. 2-3, pp. 104–115, 2008
  3. Multiple branches of ordered states of polymer ensembles with the Onsager excluded volume potential
    Physics Letters A, vol. 372, no. 19, pp. 3423–3428, 2008
  4. Stokes Efficiency of Molecular Motor-Cargo Systems
    Abstract and Applied Analysis, vol. 2008, Article ID 241736, 13 pages, 2008
  5. The Stokes efficiency for molecular motors and its applications
    Europhysics Letters (EPL), vol. 57, no. 1, pp. 134–140, 2007
  6. Continuous time random walks in closed and open single-molecule systems with microscopic reversibility
    Europhysics Letters (EPL), vol. 76, no. 1, pp. 15–21, 2007
  7. Convergence of a Numerical Method for Solving Discontinuous Fokker–Planck Equations
    SIAM Journal on Numerical Analysis, vol. 45, no. 4, p. 1425, 2007
  8. On the Equilibria of the Extended Nematic Polymers under Elongational Flow
    Abstract and Applied Analysis, vol. 2007, Article ID 36267, 15 pages, 2007
  9. Monotonicity of a Key Function Arised in Studies of Nematic Liquid Crystal Polymers
    Abstract and Applied Analysis, vol. 2007, Article ID 76209, 7 pages, 2007
  10. Characterization of stable kinetic equilibria of rigid, dipolar rod ensembles for coupled dipole–dipole and Maier–Saupe potentials
    Nonlinearity, vol. 20, no. 2, pp. 277–297, 2007
  11. Maximum cooling temperature and uniform efficiency criterion for inhomogeneous thermoelectric materials
    Physical Review B, vol. 75, no. 24, 2007
  12. On detailed balance and reversibility of semi-Markov processes and single-molecule enzyme kinetics
    Journal of Mathematical Physics, vol. 48, no. 1, p. 013303, 2007
  13. Elongational perturbations on nematic liquid crystal polymers under a weak shear
    Physics of Fluids, vol. 19, no. 10, p. 103107, 2007
  14. A new derivation of the randomness parameter
    Journal of Mathematical Physics, vol. 48, no. 10, p. 103301, 2007
  15. A conditional probability approach to M/G/1-like queues
    Performance Evaluation, 2007
  16. Mathematical and Computational Methods for Studying Energy Transduction in Protein Motors
    Journal of Statistical Physics, vol. 128, no. 1-2, pp. 35–76, 2006
  17. A numerical algorithm for investigating the role of the motor–cargo linkage in molecular motor-driven transport
    Journal of Theoretical Biology, vol. 239, no. 1, pp. 33–48, 2006
  18. Motor potential profile and a robust method for extracting it from time series of motor positions
    Journal of Theoretical Biology, vol. 242, no. 4, pp. 908–921, 2006
  19. Application of Randomization Techniques to Space-Time Convolutional Codes
    IEEE Transactions on Signal Processing, vol. 54, no. 11, pp. 4484–4489, 2006
  20. A Robust Mathematical Formulation for Studying Elastically Coupled Motor-Cargo Systems
    Journal of Computational and Theoretical Nanoscience, vol. 3, no. 6, pp. 922–932, 2006
  21. Chemical and mechanical efficiencies of molecular motors and implications for motor mechanisms
    Journal of Physics: Condensed Matter, vol. 17, no. 47, pp. S3997–S4014, 2005
  22. A new proof on axisymmetric equilibria of a three-dimensional Smoluchowski equation
    Nonlinearity, vol. 18, no. 6, pp. 2815–2825, 2005
  23. From Continuum Fokker-Planck Models to Discrete Kinetic Models
    Biophysical Journal, vol. 89, no. 3, pp. 1551–1563, 2005
  24. Torque Generation by the Fo motor of the Sodium ATPase
    Biophysical Journal, vol. 87, no. 4, pp. 2148–2163, 2004
  25. Mathematical theory of molecular motors and a new approach for uncovering motor mechanism
    IEE Proceedings - Nanobiotechnology, vol. 150, no. 3, p. 127, 2003
  26. A Robust Numerical Algorithm for Studying Biomolecular Transport Processes
    Journal of Theoretical Biology, vol. 221, no. 4, pp. 491–511, 2003
  27. Rotary protein motors
    Trends in Cell Biology, vol. 13, no. 3, pp. 114–121, 2003
  28. Ratchets, power strokes, and molecular motors
    Applied Physics A: Materials Science & Processing, vol. 75, no. 2, pp. 315–323, 2002
  29. Reverse engineering a protein: the mechanochemistry of ATP synthase
    Biochimica et Biophysica Acta (BBA) - Bioenergetics, vol. 1458, no. 2-3, pp. 482–510, 2000
  30. Journal of Bioenergetics and Biomembranes, vol. 32, no. 5, pp. 459–469, 2000
  31. How F o -ATPase generates rotary torque
    Philosophical Transactions of the Royal Society B: Biological Sciences, vol. 355, no. 1396, pp. 523–528, 2000
  32. ATP synthase: two motors, two fuels
    Structure, vol. 7, no. 4, pp. R67–R72, 1999
  33. Energy transduction in the sodium F-ATPase of Propionigenium modestum
    Proceedings of the National Academy of Sciences, vol. 96, no. 9, pp. 4924–4929, 1999
  34. Short Wave Instability on Vortex Filaments
    Physical Review Letters, vol. 80, no. 21, pp. 4665–4668, 1998
  35. Nature, vol. 396, no. 6708, pp. 279–282, 1998
  36. Nature, vol. 391, no. 6666, pp. 510–513, 1998