Hans J. Vogel

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http://www.ucalgary.ca/SC/BI/contact/faculty/vogel.html

Articles in Scholarly Journals [Incomplete List]

  1. Bioinformatic analysis of the TonB protein family
    BioMetals, vol. 20, no. 3-4, pp. 467–483, 2007
  2. Mass Spectrometric Determination of the Coordination Geometry of Potential Copper(II) Surrogates for the Mammalian Prion Protein Octarepeat Region
    Analytical Chemistry, vol. 79, no. 15, pp. 5659–5667, 2007
  3. Domain Stability and Metal-Induced Folding of Calcium- and Integrin-Binding Protein 1
    Biochemistry, vol. 46, no. 24, pp. 7088–7098, 2007
  4. Structures and metal-ion-binding properties of the Ca2+-binding helix–loop–helix EF-hand motifs
    Biochemical Journal, vol. 405, no. 2, p. 199, 2007
  5. HMDB: the Human Metabolome Database
    Nucleic Acids Research, vol. 35, no. Database, pp. D521–D526, 2007
  6. The Interaction between Calcium- and Integrin-binding Protein 1 and the  IIb Integrin Cytoplasmic Domain Involves a Novel C-terminal Displacement Mechanism
    Journal of Biological Chemistry, vol. 281, no. 36, pp. 26455–26464, 2006
  7. Structural and Functional Characterization of the Conserved Salt Bridge in Mammalian Paneth Cell  -Defensins: SOLUTION STRUCTURES OF MOUSE CRYPTDIN-4 AND (E15D)-CRYPTDIN-4
    Journal of Biological Chemistry, vol. 281, no. 38, pp. 28068–28078, 2006
  8. Calcium-dependent and -independent Binding of Soybean Calmodulin Isoforms to the Calmodulin Binding Domain of Tobacco MAPK Phosphatase-1
    Journal of Biological Chemistry, vol. 282, no. 9, pp. 6031–6042, 2006
  9. Comparison of NMR structures and model-membrane interactions of 15-residue antimicrobial peptides derived from bovine lactoferricin
    Biochemistry and Cell Biology, vol. 84, no. 3, pp. 312–326, 2006
  10. Structure-Function Analysis of Tritrpticin Analogs: Potential Relationships between Antimicrobial Activities, Model Membrane Interactions, and Their Micelle-Bound NMR Structures
    Biophysical Journal, vol. 91, no. 12, pp. 4413–4426, 2006
  11. Protein-Peptide Interaction Studies Demonstrate the Versatility of Calmodulin Target Protein Binding
    Protein and Peptide Letters, vol. 13, no. 5, pp. 455–465, 2006
  12. Tryptophan- and arginine-rich antimicrobial peptides: Structures and mechanisms of action
    Biochimica et Biophysica Acta (BBA) - Biomembranes, vol. 1758, no. 9, pp. 1184–1202, 2006
  13. Solvent-dependent structure of two tryptophan-rich antimicrobial peptides and their analogs studied by FTIR and CD spectroscopy
    Biochimica et Biophysica Acta (BBA) - Biomembranes, vol. 1758, no. 10, pp. 1596–1608, 2006
  14. Characterization of TonB Interactions with the FepA Cork Domain and FecA N-terminal Signaling Domain
    BioMetals, vol. 19, no. 2, pp. 127–142, 2006
  15. Optimization of the hydrochloric acid concentration used for trifluoroacetate removal from synthetic peptides
    Journal of Peptide Science, vol. 13, no. 1, pp. 37–43, 2006
  16. Structural studies and model membrane interactions of two peptides derived from bovine lactoferricin
    Journal of Peptide Science, vol. 11, no. 7, pp. 379–389, 2005
  17. Headgroup structure and fatty acid chain length of the acidic phospholipids modulate the interaction of membrane mimetic vesicles with the antimicrobial peptide protegrin-1
    Journal of Peptide Science, vol. 11, no. 11, pp. 735–743, 2005
  18. Isotope-labeled vibrational circular dichroism studies of calmodulin and its interactions with ligands
    Biopolymers, vol. 79, no. 5, pp. 231–237, 2005
  19. Molecular Dynamics Simulations of the Periplasmic Ferric-hydroxamate Binding Protein FhuD
    BioMetals, vol. 18, no. 4, pp. 375–386, 2005
  20. Lactoferricin
    Cellular and Molecular Life Sciences, vol. 62, no. 22, pp. 2588–2598, 2005
  21. The Solution Structure of the C-terminal Domain of TonB and Interaction Studies with TonB Box Peptides
    Journal of Molecular Biology, vol. 345, no. 5, pp. 1185–1197, 2005
  22. Circular Proteins: Ring around with NOESY
    Structure, vol. 13, no. 5, pp. 688–690, 2005
  23. The interactions of antimicrobial peptides derived from lysozyme with model membrane systems
    Biochimica et Biophysica Acta (BBA) - Biomembranes, vol. 1668, no. 2, pp. 175–189, 2005
  24. Homology Modeling Identifies C-Terminal Residues that Contribute to the Ca2+ Sensitivity of a BKCa Channel
    Biophysical Journal, vol. 89, no. 5, pp. 3079–3092, 2005
  25. A Salt-Bridge Motif Involved in Ligand Binding and Large-Scale Domain Motions of the Maltose-Binding Protein
    Biophysical Journal, vol. 89, no. 5, pp. 3362–3371, 2005
  26. Calcium- and magnesium-dependent interactions between calcium- and integrin-binding protein and the integrin  IIb cytoplasmic domain
    Protein Science, vol. 14, no. 6, pp. 1429–1437, 2005
  27. Nuclear magnetic resonance solution structure of the periplasmic signalling domain of the TonB-dependent outer membrane transporter FecA from Escherichia coli
    Molecular Microbiology, vol. 0, no. 0, pp. 050929024239001–???, 2005
  28. Interactions of the antimicrobial peptide Ac-FRWWHR-NH2 with model membrane systems and bacterial cells
    Journal of Peptide Research, vol. 65, no. 5, pp. 491–501, 2005
  29. Human Lactoferricin Is Partially Folded in Aqueous Solution and Is Better Stabilized in a Membrane Mimetic Solvent
    Antimicrobial Agents and Chemotherapy, vol. 49, no. 8, pp. 3387–3395, 2005
  30. Biochemistry, vol. 44, no. 8, pp. 3101–3111, 2005
  31. Biochemistry, vol. 43, no. 50, pp. 15759–15766, 2004
  32. Biochemistry, vol. 43, no. 48, pp. 15131–15140, 2004
  33. Biochemistry, vol. 43, no. 9, pp. 2558–2568, 2004
  34. Molecular dynamics simulations of bovine lactoferricin: turning a helix into a sheet
    BioMetals, vol. 17, no. 3, pp. 217–223, 2004
  35. Unexpected Structure of the Ca2+-regulatory Region from Soybean Calcium-dependent Protein Kinase- 
    Journal of Biological Chemistry, vol. 279, no. 34, pp. 35494–35502, 2004
  36. A Molecular Dynamics Study of Ca2+-Calmodulin: Evidence of Interdomain Coupling and Structural Collapse on the Nanosecond Timescale
    Biophysical Journal, vol. 87, no. 2, pp. 780–791, 2004
  37. Backbone dynamic properties of the central linker region of calcium-calmodulin in 35% trifluoroethanol
    Journal of Structural Biology, vol. 146, no. 3, pp. 272–280, 2004
  38. Nitrogen-15 NMR studies of nitrogen metabolism in buds
    Plant Physiology and Biochemistry, vol. 42, no. 10, pp. 803–809, 2004
  39. Folding forms of Escherichia coli DmsD, a twin-arginine leader binding protein
    Biochemical and Biophysical Research Communications, vol. 315, no. 2, pp. 397–403, 2004
  40. Spectroscopic characterization of the calmodulin-binding and autoinhibitory domains of calcium/calmodulin-dependent protein kinase I
    Archives of Biochemistry and Biophysics, vol. 421, no. 2, pp. 192–206, 2004
  41. Structural Basis for Simultaneous Binding of Two Carboxy-terminal Peptides of Plant Glutamate Decarboxylase to Calmodulin
    Journal of Molecular Biology, vol. 328, no. 1, pp. 193–204, 2003
  42. Conformation of a Bactericidal Domain of Puroindoline a: Structure and Mechanism of Action of a 13-Residue Antimicrobial Peptide
    Journal of Bacteriology, vol. 185, no. 16, pp. 4938–4947, 2003
  43. Protein conformational changes studied by diffusion NMR spectroscopy: Application to helix-loop-helix calcium binding proteins
    Protein Science, vol. 12, no. 2, pp. 228–236, 2003
  44. Interactions of the designed antimicrobial peptide MB21 and truncated dermaseptin S3 with lipid bilayers: molecular-dynamics simulations
    Biochemical Journal, vol. 370, no. 1, p. 233, 2003
  45. Conformational Changes in the Ca2+-regulatory Region from Soybean Calcium-dependent Protein Kinase- : FLUORESCENCE RESONANCE ENERGY TRANSFER STUDIES
    Journal of Biological Chemistry, vol. 278, no. 44, pp. 43764–43769, 2003
  46. Structurally Homologous Binding of Plant Calmodulin Isoforms to the Calmodulin-binding Domain of Vacuolar Calcium-ATPase
    Journal of Biological Chemistry, vol. 279, no. 9, pp. 7698–7707, 2003
  47. Environmental Science & Technology, vol. 37, no. 17, pp. 3935–3944, 2003
  48. The Solution Structures of the Human beta -Defensins Lead to a Better Understanding of the Potent Bactericidal Activity of HBD3 against Staphylococcus aureus
    Journal of Biological Chemistry, vol. 277, no. 10, pp. 8279–8289, 2002
  49. X-ray Crystallographic Structures of the Escherichia coli Periplasmic Protein FhuD Bound to Hydroxamate-type Siderophores and the Antibiotic Albomycin
    Journal of Biological Chemistry, vol. 277, no. 16, pp. 13966–13972, 2002
  50. The Solution Structure of Human Hepcidin, a Peptide Hormone with Antimicrobial Activity That Is Involved in Iron Uptake and Hereditary Hemochromatosis
    Journal of Biological Chemistry, vol. 277, no. 40, pp. 37597–37603, 2002
  51. Solution structures of the cytoplasmic tail complex from platelet integrin alpha IIb- and beta 3-subunits
    Proceedings of the National Academy of Sciences, vol. 99, no. 9, pp. 5878–5883, 2002
  52. BioMetals, vol. 15, no. 2, pp. 121–131, 2002
  53. Towards a structure-function analysis of bovine lactoferricin and related tryptophan- and arginine-containing peptides
    Biochemistry and Cell Biology, vol. 80, no. 1, pp. 49–63, 2002
  54. Tryptophan-rich antimicrobial peptides: comparative properties and membrane interactions
    Biochemistry and Cell Biology, vol. 80, no. 5, pp. 667–677, 2002
  55. Lentivirus Lytic Peptide 1 Perturbs both Outer and Inner Membranes of Serratia marcescens
    Antimicrobial Agents and Chemotherapy, vol. 46, no. 6, pp. 2041–2045, 2002
  56. Characterization of tetrachlorohydroquinone reductive dehalogenase from Sphingomonas sp. UG30
    Biochemical and Biophysical Research Communications, vol. 299, no. 4, pp. 634–640, 2002
  57. Biochemistry, vol. 40, no. 32, pp. 9570–9578, 2001
  58. Structural Biology of Bacterial Iron Uptake Systems
    Current Topics in Medicinal Chemistry, vol. 1, no. 1, pp. 7–30, 2001
  59. Phosphorus-31 Nuclear Magnetic Resonance Study of the Effect of Pentachlorophenol (PCP) on the Physiologies of PCP-Degrading Microorganisms
    Applied and Environmental Microbiology, vol. 67, no. 8, pp. 3549–3556, 2001
  60. Protein–membrane electrostatic interactions: Application of the Lekner summation technique
    The Journal of Chemical Physics, vol. 114, no. 4, p. 1892, 2001
  61. Mapping the interface between calmodulin and MARCKS-related protein by fluorescence spectroscopy
    Proceedings of the National Academy of Sciences, vol. 97, no. 10, pp. 5191–5196, 2000
  62. Nature Structural Biology, vol. 7, no. 4, pp. 287–291, 2000
  63. Theoretical Calculation of pKaReveals an Important Role of Arg205 in the Activity and Stability of Streptomyces sp. N174 Chitosanase
    Journal of Biological Chemistry, vol. 275, no. 33, pp. 25633–25640, 2000
  64. Tryptophan fluorescence of calmodulin binding domain peptides interacting with calmodulin containing unnatural methionine analogues
    Protein Engineering Design and Selection, vol. 13, no. 1, pp. 59–66, 2000
  65. Comparative modeling studies of the calmodulin-like domain of calcium-dependent protein kinase from soybean
    Proteins: Structure, Function, and Genetics, vol. 39, no. 4, pp. 343–357, 2000
  66. Structures of the platelet calcium- and integrin-binding protein and the ?IIb-integrin cytoplasmic domain suggest a mechanism for calcium-regulated recognition; homology modelling and NMR studies
    Journal of Molecular Recognition, vol. 13, no. 2, pp. 83–92, 2000
  67. pKa calculations of calbindin D9k: Effects of Ca2+ binding, protein dielectric constant, and ionic strength
    Proteins: Structure, Function, and Genetics, vol. 41, no. 4, pp. 554–567, 2000
  68. Calmodulin binding properties of peptide analogues and fragments of the calmodulin-binding domain of simian immunodeficiency virus transmembrane glycoprotein 41
    Biopolymers, vol. 58, no. 1, pp. 50–62, 2000
  69. Spectroscopic Characterization of the Interaction between Calmodulin-Dependent Protein Kinase I and Calmodulin
    Archives of Biochemistry and Biophysics, vol. 379, no. 1, pp. 28–36, 2000
  70. Theoretical pK a calculations of proteins; the tyrosine and lysine residues of b-elicitin
    Theoretical Chemistry Accounts: Theory, Computation, and Modeling (Theoretica Chimica Acta), vol. 101, no. 1-3, pp. 159–162, 1999
  71. Noninvasive NMR studies of metabolism in cultured Catharanthus roseus cells
    In Vitro Cellular & Developmental Biology - Plant, vol. 35, no. 2, pp. 144–151, 1999
  72. The structure of the antimicrobial active center of lactoferricin B bound to sodium dodecyl sulfate micelles
    FEBS Letters, vol. 446, no. 2-3, pp. 213–217, 1999
  73. Diversity of antimicrobial peptides and their mechanisms of action
    Biochimica et Biophysica Acta (BBA) - Biomembranes, vol. 1462, no. 1-2, pp. 11–28, 1999
  74. Lentivirus-derived antimicrobial peptides: increased potency by sequence engineering and dimerization
    Journal of Antimicrobial Chemotherapy, vol. 44, no. 1, pp. 33–41, 1999
  75. Surface Exposure of the Methionine Side Chains of Calmodulin in Solution. A NITROXIDE SPIN LABEL AND TWO-DIMENSIONAL NMR STUDY
    Journal of Biological Chemistry, vol. 274, no. 13, pp. 8411–8420, 1999
  76. Biochemistry, vol. 38, no. 5, pp. 1446–1455, 1999
  77. Biochemistry, vol. 38, no. 51, pp. 16749–16755, 1999
  78. Biochemistry, vol. 37, no. 9, pp. 3187–3195, 1998
  79. Calcium-Calmodulin-induced Dimerization of the Carboxyl-terminal Domain from Petunia Glutamate Decarboxylase. A NOVEL CALMODULIN-PEPTIDE INTERACTION MOTIF
    Journal of Biological Chemistry, vol. 273, no. 46, pp. 30328–30335, 1998
  80. Journal of Computer-Aided Molecular Design, vol. 12, no. 3, pp. 289–299, 1998
  81. BioMetals, vol. 11, no. 3, pp. 213–222, 1998
  82. Quadrupolar metal ion NMR studies of metalloproteins
    Biochemistry and Cell Biology, vol. 76, no. 2-3, pp. 210–222, 1998
  83. Structure-function relationships of antimicrobial peptides
    Biochemistry and Cell Biology, vol. 76, no. 2-3, pp. 235–246, 1998
  84. NMR spectroscopic and enzymatic studies of DNA hairpins containing mismatches in the EcoRI recognition site
    Biochemistry and Cell Biology, vol. 76, no. 2-3, pp. 391–402, 1998
  85. Characterization of the Ca2+-dependent and -independent interactions between calmodulin and its binding domain of inducible nitric oxide synthase
    FEBS Letters, vol. 431, no. 2, pp. 210–214, 1998
  86. Melatonin and serotonin interactions with calmodulin: NMR, spectroscopic and biochemical studies
    Biochimica et Biophysica Acta (BBA) - Protein Structure and Molecular Enzymology, vol. 1383, no. 1, pp. 37–47, 1998
  87. A phosphorus-31 nuclear magnetic resonance study of elicitor-mediated metabolic changes in Catharanthus roseus suspension cultures
    In Vitro Cellular & Developmental Biology - Plant, vol. 33, no. 4, pp. 301–305, 1997
  88. Soft-Pulsed Aluminum-27 Quadrupolar Central Transition NMR Studies of Ovotransferrin
    Journal of Magnetic Resonance, vol. 129, no. 2, pp. 111–114, 1997
  89. NMR studies of the RRsrc peptide, a tyrosine kinase substrate
    Biochemistry and Cell Biology, vol. 75, no. 2, pp. 163–169, 1997
  90. World Journal of Microbiology and Biotechnology, vol. 13, no. 3, pp. 305–313, 1997
  91. Biochemistry, vol. 36, no. 10, pp. 2817–2825, 1997
  92. The Journal of Physical Chemistry B, vol. 101, no. 38, pp. 7664–7673, 1997
  93. Stage-specific nitrogen metabolism in developing carrot somatic embryos
    Physiologia Plantarum, vol. 97, no. 1, pp. 149–159, 1996
  94. Nuclear Magnetic Resonance Studies of the Heteropolysaccharides Alginate,Gum arabic and Gum Xanthan
    Starch - Starke, vol. 48, no. 7-8, pp. 285–291, 1996
  95. Molecular dynamics simulations of N-terminal peptides from a nucleotide binding protein
    Proteins: Structure, Function, and Genetics, vol. 24, no. 4, pp. 450–466, 1996
  96. Ion pair formation of phosphorylated amino acids and lysine and arginine side chains: A theoretical study
    Proteins: Structure, Function, and Genetics, vol. 24, no. 4, pp. 495–501, 1996
  97. Metal-ion binding properties of the transferrins: A vanadium-51 NMR study
    Journal of Inorganic Biochemistry, vol. 62, no. 4, pp. 253–270, 1996
  98. NMR and stopped-flow studies of metal ion binding to a-lactalbumins
    Biochimica et Biophysica Acta (BBA) - Protein Structure and Molecular Enzymology, vol. 1293, no. 1, pp. 72–82, 1996
  99. Lead-207 NMR: a novel probe for the study of calcium-binding proteins
    Journal of Biological Inorganic Chemistry, vol. 1, no. 1, pp. 39–48, 1996
  100. NMR studies of the methionine methyl groups in calmodulin
    FEBS Letters, vol. 366, no. 2-3, pp. 104–108, 1995
  101. Interaction of Calmodulin with Its Binding Domain of Rat Cerebellar Nitric Oxide Synthase
    Journal of Biological Chemistry, vol. 270, no. 36, pp. 20901–20907, 1995
  102. Journal of the American Chemical Society, vol. 116, no. 5, pp. 1988–1993, 1994
  103. Journal of the American Chemical Society, vol. 116, no. 15, pp. 6971–6972, 1994
  104. Journal of the American Chemical Society, vol. 116, no. 25, pp. 11506–11511, 1994
  105. Modern technology for the preparation of battery paste
    Journal of Power Sources, vol. 48, no. 1-2, pp. 71–76, 1994
  106. Ion pair formation involving methylated lysine side chains: A theoretical study
    Proteins: Structure, Function, and Genetics, vol. 18, no. 4, pp. 381–389, 1994
  107. Two-dimensional NMR Studies of Selenomethionyl Calmodulin
    Journal of Molecular Biology, vol. 239, no. 4, pp. 545–554, 1994
  108. Biochemistry, vol. 33, no. 5, pp. 1163–1171, 1994
  109. Biochemistry, vol. 33, no. 11, pp. 3304–3311, 1994
  110. Biochemistry, vol. 33, no. 36, pp. 10883–10888, 1994
  111. Biochemistry, vol. 32, no. 2, pp. 637–645, 1993
  112. Biochemistry, vol. 32, no. 2, pp. 646–656, 1993
  113. Inorganic Chemistry, vol. 32, no. 18, pp. 3976–3979, 1993
  114. Journal of the American Chemical Society, vol. 115, no. 1, pp. 245–252, 1993
  115. Journal of the American Chemical Society, vol. 115, no. 21, pp. 9750–9753, 1993
  116. Biochemistry, vol. 31, no. 29, pp. 6761–6768, 1992
  117. Biochemistry, vol. 29, no. 23, pp. 5574–5583, 1990
  118. Biochemistry, vol. 28, no. 15, pp. 6220–6228, 1989
  119. A 35Cl--NMR study of the singular anion-binding properties of dromedary hemoglobin
    Biochimica et Biophysica Acta (BBA) - Protein Structure and Molecular Enzymology, vol. 999, no. 1, pp. 12–18, 1989
  120. Journal of Natural Products, vol. 52, no. 5, pp. 1008–1014, 1989
  121. Site-site interactions in EF-hand calcium-binding proteins. Laser-excited europium luminescence studies of 9-kDa calbindin, the pig intestinal calcium-binding protein
    European Journal of Biochemistry, vol. 172, no. 2, pp. 307–313, 1988
  122. Biochemistry, vol. 27, no. 14, pp. 5000–5008, 1988
  123. NMR as a Noninvasive Tool in Meat Research
    Annals of the New York Academy of Sciences, vol. 508, no. 1 Physiological, pp. 516–522, 1987
  124. Biochemistry, vol. 25, no. 3, pp. 584–589, 1986
  125. Biochemistry, vol. 24, no. 15, pp. 3870–3876, 1985
  126. Biochemistry, vol. 23, no. 8, pp. 1862–1870, 1984
  127. Metal-ion-dependent hydrophobic-interaction chromatography of ?-lactalbumins
    Analytical Biochemistry, vol. 140, no. 2, pp. 394–402, 1984
  128. Trifluoperazine binding to calmodulin: A shift reagent 43Ca NMR study
    Biochemical and Biophysical Research Communications, vol. 122, no. 3, pp. 1350–1356, 1984
  129. Noninvasive 31P NMR Studies of the Metabolism of Suspended and Immobilized Plant Cells
    Annals of the New York Academy of Sciences, vol. 434, no. 1, pp. 496–500, 1984
  130. Calcium-dependent hydrophobic interaction chromatography of calmodulin, troponin C and their proteolytic fragments
    FEBS Letters, vol. 157, no. 2, pp. 241–246, 1983
  131. Phosphorus-31 NMR studies of smooth muscle from guinea-pig taenia coli
    Bioscience Reports, vol. 3, no. 9, pp. 863–870, 1983
  132. Biochemistry, vol. 22, no. 3, pp. 668–674, 1983
  133. Biochemistry, vol. 22, no. 10, pp. 2309–2313, 1983
  134. Biochemistry, vol. 21, no. 23, pp. 5825–5831, 1982
  135. Biochemistry, vol. 21, no. 2, pp. 394–401, 1982
  136. Biochemistry, vol. 21, no. 6, pp. 1126–1132, 1982