Janusz M. Bujnicki

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http://www.eurasnet.info/members/janusz-m-mujnicki

Articles in Scholarly Journals [Incomplete List]

  1. Modeling and experimental analyses reveal a two-domain structure and amino acids important for the activity of aminoglycoside resistance methyltransferase Sgm
    Biochimica et Biophysica Acta (BBA) - Proteins & Proteomics, vol. 1784, no. 4, pp. 582–590, 2008
  2. Structural integrity of the Beta Beta Alpha-Metal finger motif is required for DNA binding and stable protein–DNA complex formation in R.KpnI
    Biochimica et Biophysica Acta (BBA) - Proteins & Proteomics, vol. 1784, no. 2, pp. 269–275, 2008
  3. Sequence–structure–function analysis of the bifunctional enzyme MnmC that catalyses the last two steps in the biosynthesis of hypermodified nucleoside mnm5s2U in tRNA
    Proteins: Structure, Function, and Bioinformatics, vol. 71, no. 4, pp. 2076–2085, 2008
  4. Virtual Screening and Experimental Verification to Identify Potential Inhibitors of the ErmC Methyltransferase Responsible for Bacterial Resistance against Macrolide Antibiotics
    ChemMedChem, vol. 3, no. 2, pp. 316–322, 2008
  5. Is AID a monomer in solution?
    DNA Repair, vol. 7, no. 3, pp. 349–350, 2008
  6. The PMS2 Subunit of Human MutLα Contains a Metal Ion Binding Domain of the Iron-Dependent Repressor Protein Family
    Journal of Molecular Biology, vol. 382, no. 3, pp. 610–627, 2008
  7. HsdR Subunit of the Type I Restriction-Modification Enzyme EcoR124I: Biophysical Characterisation and Structural Modelling
    Journal of Molecular Biology, vol. 376, no. 2, pp. 438–452, 2008
  8. Structural and evolutionary classification of Type II restriction enzymes based on theoretical and experimental analyses
    Nucleic Acids Research, vol. 36, no. 11, pp. 3552–3569, 2008
  9. The YqfN protein of Bacillus subtilis is the tRNA: m1A22 methyltransferase (TrmK)
    Nucleic Acids Research, vol. 36, no. 10, pp. 3252–3262, 2008
  10. Bud23 Methylates G1575 of 18S rRNA and Is Required for Efficient Nuclear Export of Pre-40S Subunits
    Molecular and Cellular Biology, vol. 28, no. 10, pp. 3151–3161, 2008
  11. The Structure of Sucrose Phosphate Synthase from Halothermothrix orenii Reveals Its Mechanism of Action and Binding Mode
    THE PLANT CELL ONLINE, vol. 20, no. 4, pp. 1059–1072, 2008
  12. The 2'-O-Ribose Methyltransferase for Cap 1 of Spliced Leader RNA and U1 Small Nuclear RNA in Trypanosoma brucei
    Molecular and Cellular Biology, vol. 27, no. 17, pp. 6084–6092, 2007
  13. Transcriptome Profile of Human Colorectal Adenomas
    Molecular Cancer Research, vol. 5, no. 12, pp. 1263–1275, 2007
  14. Probing of contacts between EcoRII DNA methyltransferase and DNA with the use of substrate analogs and molecular modeling
    Molecular Biology, vol. 41, no. 5, pp. 806–819, 2007
  15. Novel protein fold discovered in the PabI family of restriction enzymes
    Nucleic Acids Research, vol. 35, no. 6, pp. 1908–1918, 2007
  16. EXOG, a novel paralog of Endonuclease G in higher eukaryotes
    Nucleic Acids Research, vol. 36, no. 4, pp. 1369–1379, 2007
  17. Functional specialization of domains tandemly duplicated within 16S rRNA methyltransferase RsmC
    Nucleic Acids Research, vol. 35, no. 13, pp. 4264–4274, 2007
  18. Conserved amino acids in each subunit of the heteroligomeric tRNA m1A58 Mtase from Saccharomyces cerevisiae contribute to tRNA binding
    Nucleic Acids Research, vol. 35, no. 20, pp. 6808–6819, 2007
  19. Type II restriction endonuclease R.Eco29kI is a member of the GIY-YIG nuclease superfamily
    BMC Structural Biology, vol. 7, no. 1, p. 48, 2007
  20. Structure and Evolutionary Origin of Ca2+-Dependent Herring Type II Antifreeze Protein
    PLoS ONE, vol. 2, no. 6, p. e548, 2007
  21. Predicting the Complex Structure and Functional Motions of the Outer Membrane Transporter and Signal Transducer FecA
    Biophysical Journal, vol. 94, no. 7, pp. 2482–2491, 2007
  22. I-Ssp6803I: the first homing endonuclease from the PD-(D/E)XK superfamily exhibits an unusual mode of DNA recognition
    Bioinformatics, vol. 23, no. 5, pp. 527–530, 2007
  23. PROTMAP2D: visualization, comparison and analysis of 2D maps of protein structure
    Bioinformatics, vol. 23, no. 11, pp. 1429–1430, 2007
  24. The TbMTr1 Spliced Leader RNA Cap 1 2 '-O-Ribose Methyltransferase from Trypanosoma brucei Acts with Substrate Specificity
    Journal of Biological Chemistry, vol. 283, no. 6, pp. 3161–3172, 2007
  25. SURF’s UP! — Protein classification by surface comparisons
    Journal of Biosciences, vol. 32, no. 1, pp. 97–100, 2007
  26. Structure of a Multipartite Protein-Protein Interaction Domain in Splicing Factor Prp8 and Its Link to Retinitis Pigmentosa
    Molecular Cell, vol. 25, no. 4, pp. 615–624, 2007
  27. Identification of a Single HNH Active Site in Type IIS Restriction Endonuclease Eco31I
    Journal of Molecular Biology, vol. 370, no. 1, pp. 157–169, 2007
  28. Structural bioinformatics analysis of enzymes involved in the biosynthesis pathway of the hypermodified nucleoside ms2io6A37 in tRNA
    Proteins: Structure, Function, and Bioinformatics, vol. 70, no. 1, pp. 1–18, 2007
  29. A model of restriction endonuclease MvaI in complex with DNA: A template for interpretation of experimental data and a guide for specificity engineering
    Proteins: Structure, Function, and Bioinformatics, vol. 68, no. 1, pp. 324–336, 2007
  30. Phylogenetic analysis of haloalkane dehalogenases
    Proteins: Structure, Function, and Bioinformatics, vol. 67, no. 2, pp. 305–316, 2007
  31. Identification of a new subfamily of HNH nucleases and experimental characterization of a representative member, HphI restriction endonuclease
    Proteins: Structure, Function, and Bioinformatics, vol. 65, no. 4, pp. 867–876, 2006
  32. Theoretical model of restriction endonuclease HpaI in complex with DNA, predicted by fold recognition and validated by site-directed mutagenesis
    Proteins: Structure, Function, and Bioinformatics, vol. 63, no. 4, pp. 1059–1068, 2006
  33. Casein kinases phosphorylate multiple residues spanning the entire hnRNP K length
    Biochimica et Biophysica Acta (BBA) - Proteins & Proteomics, vol. 1764, no. 2, pp. 299–306, 2006
  34. Characterization of prmt7a and ß isozymes from Chinese hamster cells sensitive and resistant to topoisomerase II inhibitors
    Biochimica et Biophysica Acta (BBA) - General Subjects, vol. 1760, no. 11, pp. 1646–1656, 2006
  35. Protein-Structure Prediction by Recombination of Fragments
    ChemBioChem, vol. 7, no. 1, pp. 19–27, 2006
  36. Helicobacter pylori protein oxidation influences the colonization process
    International Journal of Medical Microbiology, vol. 296, no. 4-5, pp. 321–324, 2006
  37. Chemical Reviews, vol. 106, no. 2, pp. 700–719, 2006
  38. Editing of hnRNP K protein mRNA in colorectal adenocarcinoma and surrounding mucosa
    British Journal of Cancer, vol. 94, no. 4, Article ID 6602938, 6 pages, 2006
  39. Crystal structure of Bacillus subtilis TrmB, the tRNA (m7G46) methyltransferase
    Nucleic Acids Research, vol. 34, no. 6, pp. 1925–1934, 2006
  40. Structural model for the multisubunit Type IC restriction-modification DNA methyltransferase M.EcoR124I in complex with DNA
    Nucleic Acids Research, vol. 34, no. 7, pp. 1992–2005, 2006
  41. THUMP from archaeal tRNA:m22G10 methyltransferase, a genuine autonomously folding domain
    Nucleic Acids Research, vol. 34, no. 9, pp. 2483–2494, 2006
  42. Sequence-dependent enhancement of hydrolytic deamination of cytosines in DNA by the restriction enzyme PspGI
    Nucleic Acids Research, vol. 34, no. 13, pp. 3762–3770, 2006
  43. Functional analysis of amino acid residues at the dimerisation interface of KpnI DNA methyltransferase
    Biological Chemistry, vol. 387, no. 5, pp. 515–523, 2006
  44. MODOMICS: a database of RNA modification pathways
    Nucleic Acids Research, vol. 34, no. 90001, pp. D145–D149, 2006
  45. Malaria: Therapy, Genes and Vaccines
    Current Molecular Medicine, vol. 6, no. 3, pp. 309–326, 2006
  46. BMC Genomics, vol. 7, no. 1, p. 98, 2006
  47. Human lysosomal DNase II  contains two requisite PLD-signature (HxK) motifs: Evidence for a pseudodimeric structure of the active enzyme species
    Protein Science, vol. 16, no. 1, pp. 82–91, 2006
  48. Binding of the low-density lipoprotein by streptococcal collagen-like protein Scl1 of Streptococcus pyogenes
    Molecular Microbiology, vol. 61, no. 2, pp. 351–367, 2006
  49. Complete Cap 4 Formation Is Not Required for Viability in Trypanosoma brucei
    Eukaryotic Cell, vol. 5, no. 6, pp. 905–915, 2006
  50. Curcumin induces caspase-3-dependent apoptotic pathway but inhibits DNA fragmentation factor 40/caspase-activated DNase endonuclease in human Jurkat cells
    Molecular Cancer Therapeutics, vol. 5, no. 4, pp. 927–934, 2006
  51. BMC Evolutionary Biology, vol. 6, no. 1, p. 6, 2006
  52. BMC Molecular Biology, vol. 7, no. 1, p. 23, 2006
  53. BMC Structural Biology, vol. 5, no. 1, p. 2, 2005
  54. Discovery of a novel restriction endonuclease by genome comparison and application of a wheat-germ-based cell-free translation assay: PabI (5'-GTA/C) from the hyperthermophilic archaeon Pyrococcus abyssi
    Nucleic Acids Research, vol. 33, no. 13, pp. e112–e112, 2005
  55. Inference of relationships in the 'twilight zone' of homology using a combination of bioinformatics and site-directed mutagenesis: a case study of restriction endonucleases Bsp6I and PvuII
    Nucleic Acids Research, vol. 33, no. 2, pp. 661–671, 2005
  56. A theoretical model of restriction endonuclease NlaIV in complex with DNA, predicted by fold recognition and validated by site-directed mutagenesis and circular dichroism spectroscopy
    Protein Engineering Design and Selection, vol. 18, no. 4, pp. 181–189, 2005
  57. BMC Bioinformatics, vol. 6, no. 1, p. 172, 2005
  58. BMC Genomics, vol. 6, no. 1, p. 21, 2005
  59. Trm11p and Trm112p Are both Required for the Formation of 2-Methylguanosine at Position 10 in Yeast tRNA
    Molecular and Cellular Biology, vol. 25, no. 11, pp. 4359–4370, 2005
  60. Characterization of new DsbB-like thiol-oxidoreductases of Campylobacter jejuni and Helicobacter pylori and classification of the DsbB family based on phylogenomic, structural and functional criteria
    Microbiology, vol. 151, no. 1, pp. 219–231, 2005
  61. Theoretical predictions of the impact of the trisubstituted pyrophosphate internucleotide bond on B DNA fragments
    Journal of Molecular Structure: THEOCHEM, vol. 756, no. 1-3, pp. 63–71, 2005
  62. DNase II is a member of the phospholipase D superfamily
    Bioinformatics, vol. 21, no. 21, pp. 3959–3962, 2005
  63. Molecular modelling of a psychrophilic ß-galactosidase
    Biocatalysis and Biotransformation, vol. 23, no. 3-4, pp. 201–209, 2005
  64. Mva1269I: A Monomeric Type IIS Restriction Endonuclease from Micrococcus Varians with Two EcoRI- and FokI-like Catalytic Domains
    Journal of Biological Chemistry, vol. 280, no. 50, pp. 41584–41594, 2005
  65. The Yeast Arr4p ATPase Binds the Chloride Transporter Gef1p When Copper Is Available in the Cytosol
    Journal of Biological Chemistry, vol. 281, no. 1, pp. 410–417, 2005
  66. Identification of base-specific contacts in protein?DNA complexes by photocrosslinking and mass spectrometry: a case study using the restriction endonuclease SsoII
    Molecular BioSystems, vol. 1, no. 2, p. 135, 2005
  67. Analysis of the Quaternary Structure of the MutL C-terminal Domain
    Journal of Molecular Biology, vol. 351, no. 4, pp. 895–909, 2005
  68. FRankenstein becomes a cyborg: The automatic recombination and realignment of fold recognition models in CASP6
    Proteins: Structure, Function, and Bioinformatics, vol. 61, no. S7, pp. 106–113, 2005
  69. Generalized protein structure prediction based on combination of fold-recognition with de novo folding and evaluation of models
    Proteins: Structure, Function, and Bioinformatics, vol. 61, no. S7, pp. 84–90, 2005
  70. Sequence-structure-function relationships of a tRNA (m7G46) methyltransferase studied by homology modeling and site-directed mutagenesis
    Proteins: Structure, Function, and Bioinformatics, vol. 59, no. 3, pp. 482–488, 2005
  71. Cooperative binding of the hnRNP K three KH domains to mRNA targets
    FEBS Letters, vol. 577, no. 1-2, pp. 134–140, 2004
  72. Identification of amino acids important for target recognition by the DNA:m5C methyltransferase M.NgoPII by alanine-scanning mutagenesis of residues at the protein-DNA interface
    Proteins: Structure, Function, and Bioinformatics, vol. 58, no. 2, pp. 263–270, 2004
  73. Biochemistry, vol. 43, no. 2, pp. 569–576, 2004
  74. Mutational analysis of basic residues in the N-terminus of the rRNA:m6A methyltransferase ErmC′
    Folia Microbiologica, vol. 49, no. 1, pp. 3–7, 2004
  75. Structural and Functional Characterization of Mitochondrial EndoG, a Sugar Non-specific Nuclease which Plays an Important Role During Apoptosis
    Journal of Molecular Biology, vol. 338, no. 2, pp. 217–228, 2004
  76. Specificity Changes in the Evolution of Type II Restriction Endonucleases: A BIOCHEMICAL AND BIOINFORMATIC ANALYSIS OF RESTRICTION ENZYMES THAT RECOGNIZE UNRELATED SEQUENCES
    Journal of Biological Chemistry, vol. 280, no. 6, pp. 4289–4298, 2004
  77. N2-Methylation of Guanosine at Position 10 in tRNA Is Catalyzed by a THUMP Domain-containing, S-Adenosylmethionine-dependent Methyltransferase, Conserved in Archaea and Eukaryota
    Journal of Biological Chemistry, vol. 279, no. 35, pp. 37142–37152, 2004
  78. Identification of a bifunctional enzyme MnmC involved in the biosynthesis of a hypermodified uridine in the wobble position of tRNA
    RNA, vol. 10, no. 8, pp. 1236–1242, 2004
  79. Type II restriction endonuclease R.KpnI is a member of the HNH nuclease superfamily
    Nucleic Acids Research, vol. 32, no. 20, pp. 6129–6135, 2004
  80. A primordial RNA modification enzyme: the case of tRNA (m1A) methyltransferase
    Nucleic Acids Research, vol. 32, no. 2, pp. 465–476, 2004
  81. Probabilistic cross-link analysis and experiment planning for high-throughput elucidation of protein structure
    Protein Science, vol. 13, no. 12, pp. 3298–3313, 2004
  82. COLORADO3D, a web server for the visual analysis of protein structures
    Nucleic Acids Research, vol. 32, no. Web Server, pp. W586–W589, 2004
  83. Sequence-structure-function studies of tRNA:m5C methyltransferase Trm4p and its relationship to DNA:m5C and RNA:m5U methyltransferases
    Nucleic Acids Research, vol. 32, no. 8, pp. 2453–2463, 2004
  84. BMC Genomics, vol. 4, no. 1, p. 48, 2003
  85. STRUCLA: a WWW meta-server for protein structure comparison and evolutionary classification
    Bioinformatics, vol. 19, no. 90001, pp. 252i–254, 2003
  86. The yggH Gene of Escherichia coli Encodes a tRNA (m7G46) Methyltransferase
    Journal of Bacteriology, vol. 185, no. 10, pp. 3238–3243, 2003
  87. Crystallographic and Bioinformatic Studies on Restriction Endonucleases: Inference of Evolutionary Relationships in the “Midnight Zone” of Homology
    Current Protein and Peptide Science, vol. 4, no. 5, pp. 327–337, 2003
  88. BMC Bioinformatics, vol. 4, no. 1, p. 9, 2003
  89. Anti-HIV-1 activity of 3-deaza-adenosine analogs. Inhibition of S-adenosylhomocysteine hydrolase and nucleotide congeners
    European Journal of Biochemistry, vol. 270, no. 17, pp. 3507–3517, 2003
  90. Cloning and characterization of tRNA (m1A58) methyltransferase (TrmI) from Thermus thermophilus HB27, a protein required for cell growth at extreme temperatures
    Nucleic Acids Research, vol. 31, no. 8, pp. 2148–2156, 2003
  91. GeneSilico protein structure prediction meta-server
    Nucleic Acids Research, vol. 31, no. 13, pp. 3305–3307, 2003
  92. ORFeus: detection of distant homology using sequence profiles and predicted secondary structure
    Nucleic Acids Research, vol. 31, no. 13, pp. 3804–3807, 2003
  93. Topological Measurement of an A-tract Bend Angle: Comparison of the Bent and Straightened States
    Journal of Molecular Biology, vol. 326, no. 3, pp. 737–749, 2003
  94. PspGI, a Type II Restriction Endonuclease from the Extreme Thermophile Pyrococcus sp.: Structural and Functional Studies to Investigate an Evolutionary Relationship with Several Mesophilic Restriction Enzymes
    Journal of Molecular Biology, vol. 329, no. 5, pp. 913–929, 2003
  95. Alanine-scanning mutagenesis of the predicted rRNA-binding domain of ErmC' redefines the substrate-binding site and suggests a model for protein-RNA interactions
    Nucleic Acids Research, vol. 31, no. 16, pp. 4941–4949, 2003
  96. Molecular phylogenetics of the RrmJ/fibrillarin superfamily of ribose 2'-O-methyltransferases
    Gene, vol. 302, no. 1-2, pp. 129–138, 2003
  97. Sequence-structure-function relationships of Tgs1, the yeast snRNA/snoRNA cap hypermethylase
    Nucleic Acids Research, vol. 31, no. 16, pp. 4899–4909, 2003
  98. Mutational Analysis Defines the Roles of Conserved Amino Acid Residues in the Predicted Catalytic Pocket of the rRNA:m6A Methyltransferase ErmC'
    Journal of Molecular Biology, vol. 332, no. 1, pp. 99–109, 2003
  99. Biochemistry, vol. 42, no. 31, pp. 9288–9294, 2003
  100. A ?FRankenstein's monster? approach to comparative modeling: Merging the finest fragments of Fold-Recognition models and iterative model refinement aided by 3D structure evaluation
    Proteins: Structure, Function, and Genetics, vol. 53, no. S6, pp. 369–379, 2003
  101. Structure, evolution, and inhibitor interaction ofS-adenosyl-L-homocysteine hydrolase fromPlasmodium falciparum
    Proteins: Structure, Function, and Genetics, vol. 52, no. 4, pp. 624–632, 2003
  102. Fold recognition, homology modeling, docking simulations, kinetics analysis and mutagenesis of ATP/CTP:tRNA nucleotidyltransferase fromMethanococcus jannaschii
    Proteins: Structure, Function, and Genetics, vol. 52, no. 3, pp. 349–359, 2003
  103. LiveBench-2: Large-scale automated evaluation of protein structure prediction servers
    Proteins: Structure, Function, and Genetics, vol. 45, no. S5, pp. 184–191, 2002
  104. Structure Prediction and Phylogenetic Analysis of a Functionally Diverse Family of Proteins Homologous to the MT-A70 Subunit of the Human mRNA:m6A Methyltransferase
    Journal of Molecular Evolution, vol. 55, no. 4, pp. 431–444, 2002
  105. Errors in the D. radiodurans large ribosomal subunit structure detected by protein fold-recognition and structure validation tools
    FEBS Letters, vol. 525, no. 1-3, pp. 174–175, 2002
  106. The hppA gene of Helicobacter pylori encodes the class C acid phosphatase precursor
    FEBS Letters, vol. 525, no. 1-3, pp. 39–42, 2002
  107. Trm7p catalyses the formation of two 2'-O-methylriboses in yeast tRNA anticodon loop
    The EMBO Journal, vol. 21, no. 7, pp. 1811–1820, 2002
  108. MRM2 encodes a novel yeast mitochondrial 21S rRNA methyltransferase
    The EMBO Journal, vol. 21, no. 5, pp. 1139–1147, 2002
  109. Streptococcal Scl1 and Scl2 Proteins Form Collagen-like Triple Helices
    Journal of Biological Chemistry, vol. 277, no. 30, pp. 27312–27318, 2002
  110. Fold-recognition analysis predicts that the Tag protein family shares a common domain with the helix-hairpin-helix DNA glycosylases
    DNA Repair, vol. 1, no. 5, pp. 391–395, 2002
  111. Evolutionary Relationship between Different Subgroups of Restriction Endonucleases
    Journal of Biological Chemistry, vol. 277, no. 16, pp. 14306–14314, 2002
  112. BMC Bioinformatics, vol. 3, no. 1, p. 10, 2002
  113. In silico identification, structure prediction and phylogenetic analysis of the 2'-O-ribose (cap 1) methyltransferase domain in the large structural protein of ssRNA negative-strand viruses
    Protein Engineering Design and Selection, vol. 15, no. 2, pp. 101–108, 2002
  114. Fold-recognition detects an error in the Protein Data Bank
    Bioinformatics, vol. 18, no. 10, pp. 1391–1395, 2002
  115. BMC Evolutionary Biology, vol. 2, no. 1, p. 3, 2002
  116. Pcons: A neural-network-based consensus predictor that improves fold recognition
    Protein Science, vol. 10, no. 11, pp. 2354–2362, 2001
  117. Unusual evolutionary history of the tRNA splicing endonuclease EndA: Relationship to the LAGLIDADG and PD-(D/E)XK deoxyribonucleases
    Protein Science, vol. 10, no. 3, pp. 656–660, 2001
  118. Three-dimensional modeling of the I-TevI homing endonuclease catalytic domain, a GIY-YIG superfamily member, using NMR restraints and Monte Carlo dynamics
    Protein Engineering Design and Selection, vol. 14, no. 10, pp. 717–721, 2001
  119. LiveBench-1: Continuous benchmarking of protein structure prediction servers
    Protein Science, vol. 10, no. 2, pp. 352–361, 2001
  120. BMC Bioinformatics, vol. 2, no. 1, p. 2, 2001
  121. Polyphyletic evolution of type II restriction enzymes revisited: two independent sources of second-hand folds revealed
    Trends in Biochemical Sciences, vol. 26, no. 1, pp. 9–11, 2001
  122. Structure prediction meta server
    Bioinformatics, vol. 17, no. 8, pp. 750–751, 2001
  123. In silico analysis of the tRNA:m1A58 methyltransferase family: homology-based fold prediction and identification of new members from Eubacteria and Archaea
    FEBS Letters, vol. 507, no. 2, pp. 123–127, 2001
  124. Virus Genes, vol. 22, no. 2, pp. 219–230, 2001
  125. Identification of a PD-(D/E)XK-like domain with a novel configuration of the endonuclease active site in the methyl-directed restriction enzyme Mrr and its homologs
    Gene, vol. 267, no. 2, pp. 183–191, 2001
  126. Homology modelling of the DNA 5mC methyltransferase M.BssHII. Is permutation of functional subdomains common to all subfamilies of DNA methyltransferases?
    International Journal of Biological Macromolecules, vol. 27, no. 3, pp. 195–204, 2000
  127. Prediction of a common fold for all four subunits of the yeast tRNA splicing endonuclease: implications for the evolution of the EndA/Sen family
    FEBS Letters, vol. 486, no. 3, pp. 328–329, 2000
  128. Atomic model of the 5-methylcytosine-specific restriction enzyme McrA reveals an atypical zinc finger and structural similarity to betabetaalphaMe endonucleases
    Molecular Microbiology, vol. 37, no. 5, pp. 1280–1281, 2000
  129. Phylogenomic analysis of 16S rRNA:(guanine-N2) methyltransferases suggests new family members and reveals highly conserved motifs and a domain structure similar to other nucleic acid amino-methyltransferases
    The FASEB Journal, vol. 14, no. 14, pp. 2365–2368, 2000
  130. Molecular evolution of DNA-(cytosine-N4) methyltransferases: evidence for their polyphyletic origin
    Nucleic Acids Research, vol. 27, no. 22, pp. 4501–4509, 1999
  131. Is the HemK Family of Putative S-Adenosylmethionine-Dependent Methyltransferases a "Missing" zeta Subfamily of Adenine Methyltransferases? A Hypothesis
    International Union of Biochemistry and Molecular Biology: Life, vol. 48, no. 3, pp. 247–249, 1999
  132. Structural characterization of two tandemly arranged DNA methyltransferase genes fromNeisseria gonorrhoeae MS11: N4-cytosine specific M.NgoMXV and nonfunctional 5-cytosine-type M.NgoMorf2P
    Proteins: Structure, Function, and Genetics, vol. 37, no. 4, pp. 717–728, 1999