O. John Semmes

Articles in Scholarly Journals [Incomplete List]

  1. Serum Biomarkers to Differentiate Benign and Malignant Mammographic Lesions
    Journal of the American College of Surgeons, vol. 204, no. 5, pp. 1065–1071, 2007
  2. Site-specific Phosphorylation Differentiates Active from Inactive Forms of the Human T-cell Leukemia Virus Type 1 Tax Oncoprotein
    Journal of Biological Chemistry, vol. 281, no. 42, pp. 31705–31712, 2006
  3. Lectin Capture Strategies Combined with Mass Spectrometry for the Discovery of Serum Glycoprotein Biomarkers
    Molecular & Cellular Proteomics, vol. 5, no. 10, pp. 1957–1967, 2006
  4. Overexpression of a-defensin is associated with bladder cancer invasiveness?
    Urologic Oncology: Seminars and Original Investigations, vol. 24, no. 2, pp. 97–108, 2006
  5. Feature extraction in the analysis of proteomic mass spectra
    PROTEOMICS, vol. 6, no. 7, pp. 2095–2100, 2006
  6. Deconvolution filters to enhance resolution of dense time-of-flight survey spectra in the time-lag optimization range
    Rapid Communications in Mass Spectrometry, vol. 20, no. 11, pp. 1661–1669, 2006
  7. Resampling and deconvolution of linear time-of-flight records for enhanced protein profiling
    Rapid Communications in Mass Spectrometry, vol. 20, no. 11, pp. 1670–1678, 2006
  8. Application of mass spectrometry to the discovery of biomarkers for detection of prostate cancer
    Journal of Cellular Biochemistry, vol. 98, no. 3, pp. 496–503, 2006
  9. Adult T cell leukemia: a tale of two T cells
    Journal of Clinical Investigation, vol. 116, no. 4, pp. 858–860, 2006
  10. Cancer Cell International, vol. 6, no. 1, p. 13, 2006
  11. The "omics" Haystack: Defining Sources of Sample Bias in Expression Profiling
    Clinical Chemistry, vol. 51, no. 9, pp. 1571–1572, 2005
  12. Serum, salivary and tissue proteomics for discovery of biomarkers for head and neck cancers
    Expert Review of Molecular Diagnostics, vol. 5, no. 1, pp. 93–100, 2005
  13. The bZIP Transcription Factor ATFx Binds Human T-Cell Leukemia Virus Type 1 (HTLV-1) Tax and Represses HTLV-1 Long Terminal Repeat-Mediated Transcription
    Journal of Virology, vol. 79, no. 11, pp. 6932–6939, 2005
  14. Functional Clustering Algorithm for High-Dimensional Proteomics Data
    Journal of Biomedicine and Biotechnology, vol. 2005, no. 2, pp. 80–86, 2005
  15. Analysis of Human Proteome Organization Plasma Proteome Project (HUPO PPP) reference specimens using surface enhanced laser desorption/ionization-time of flight (SELDI-TOF) mass spectrometry: Multi-institution correlation of spectra and identification of biomarkers
    PROTEOMICS, vol. 5, no. 13, pp. 3467–3474, 2005
  16. SELDI-TOF MS profiling of serum for detection of the progression of chronic hepatitis C to hepatocellular carcinoma
    Hepatology, vol. 41, no. 3, pp. 634–642, 2005
  17. Discrete serum protein signatures discriminate between human retrovirus-associated hematologic and neurologic disease
    Leukemia, vol. 19, no. 7, Article ID 2403781, 9 pages, 2005
  18. Impact of HTLV-I Tax on cell cycle progression and the cellular DNA damage repair response
    Oncogene, vol. 24, no. 39, Article ID 1208976, 9 pages, 2005
  19. A novel approach for clustering proteomics data using Bayesian fast Fourier transform
    Bioinformatics, vol. 21, no. 10, pp. 2210–2224, 2005
  20. The early detection research network surface-enhanced laser desorption and ionization prostate cancer detection study: A study in biomarker validation in genitourinary oncology
    Urologic Oncology: Seminars and Original Investigations, vol. 22, no. 4, pp. 337–343, 2004
  21. Selective capture of prostatic basal cells and secretory epithelial cells for proteomic and genomic analysis?*1
    Urologic Oncology: Seminars and Original Investigations, vol. 22, no. 4, pp. 329–336, 2004
  22. Ga+ TOF-SIMS lineshape analysis for resolution enhancement of MALDI MS spectra of a peptide mixture
    Applied Surface Science, vol. 231-232, pp. 357–361, 2004
  23. Pharmacoproteomic analysis of prechemotherapy and postchemotherapy plasma samples from patients receiving neoadjuvant or adjuvant chemotherapy for breast carcinoma
    Cancer, vol. 100, no. 9, pp. 1814–1822, 2004
  24. Identification of Patients With Head and Neck Cancer Using Serum Protein Profiles
    Archives of Otolaryngology - Head and Neck Surgery, vol. 130, no. 1, pp. 98–104, 2004
  25. Comparative proteomic analysis of de-N-glycosylated serum from hepatitis B carriers reveals polypeptides that correlate with disease status
    PROTEOMICS, vol. 4, no. 3, pp. 826–838, 2004
  26. EXPRESSION OF GENES AND PROTEINS SPECIFIC FOR PROSTATE CANCER
    The Journal of Urology, vol. 172, no. 5, pp. S23–S27, 2004
  27. BMC Bioinformatics, vol. 5, no. 1, p. 26, 2004
  28. Retrotransposition-Competent Human LINE-1 Induces Apoptosis in Cancer Cells With Intact p53
    Journal of Biomedicine and Biotechnology, vol. 2004, no. 4, pp. 185–194, 2004
  29. Serum Protein Profiles to Identify Head and Neck Cancer
    Clinical Cancer Research, vol. 10, no. 5, pp. 1625–1632, 2004
  30. Surfaced-Enhanced Laser Desorption/Ionization Time-of-Flight (SELDI-TOF) Differentiation of Serum Protein Profiles of BRCA-1 and Sporadic Breast Cancer
    Annals of Surgical Oncology, vol. 11, no. 10, pp. 907–914, 2004
  31. Protein Profiling in Urine for the Diagnosis of Bladder Cancer
    Clinical Chemistry, vol. 50, no. 8, pp. 1438–1441, 2004
  32. Enhancement of Sensitivity and Resolution of Surface-Enhanced Laser Desorption/Ionization Time-of-Flight Mass Spectrometric Records for Serum Peptides Using Time-Series Analysis Techniques
    Clinical Chemistry, vol. 51, no. 1, pp. 65–74, 2004
  33. Evaluation of Serum Protein Profiling by Surface-Enhanced Laser Desorption/Ionization Time-of-Flight Mass Spectrometry for the Detection of Prostate Cancer: I. Assessment of Platform Reproducibility
    Clinical Chemistry, vol. 51, no. 1, pp. 102–112, 2004
  34. Proteomics in Health and Disease
    Journal of Biomedicine and Biotechnology, vol. 2003, no. 4, pp. 215–216, 2003
  35. The HTLV-1 Tax Oncoprotein Attenuates DNA Damage Induced G1 Arrest and Enhances Apoptosis in p53 Null Cells
    Virology, vol. 305, no. 2, pp. 229–239, 2003
  36. Human T-cell Leukemia Virus-I Tax Oncoprotein Functionally Targets a Subnuclear Complex Involved in Cellular DNA Damage-Response
    Journal of Biological Chemistry, vol. 278, no. 39, pp. 37736–37744, 2003
  37. Interaction of Retroviral Tax Oncoproteins With Tristetraprolin and Regulation of Tumor Necrosis Factor-  Expression
    CancerSpectrum Knowledge Environment, vol. 95, no. 24, pp. 1846–1859, 2003
  38. Properties of Two EBV Mta Nuclear Export Signal Sequences
    Virology, vol. 288, no. 1, pp. 119–128, 2001
  39. Proteomic approaches to biomarker discovery in prostate and bladder cancers
    PROTEOMICS, vol. 1, no. 10, pp. 1264–1270, 2001
  40. Human T-Cell Leukemia Virus Type 1 Tax Shuttles between Functionally Discrete Subcellular Targets
    Journal of Virology, vol. 74, no. 5, pp. 2351–2364, 2000
  41. Analysis of potential phosphorylation sites in human T cell leukemia virus type 1 Tax
    Journal of Biomedical Science, vol. 6, no. 3, pp. 206–212, 1999
  42. A Human T-cell Leukemia Virus Tax Variant Incapable of Activating NF-kappa B Retains Its Immortalizing Potential for Primary T-lymphocytes
    Journal of Biological Chemistry, vol. 273, no. 12, pp. 6698–6703, 1998
  43. Divergent subcellular locations of HTLV-I tax and Int-6: A contrast between in vitro protein-protein binding and intracellular protein colocalization
    Journal of Biomedical Science, vol. 4, no. 5, pp. 229–234, 1997
  44. HTLV-I tax and cytokeratin: Tax-expressing cells show morphological changes in keratin-containing cytoskeletal networks
    Journal of Biomedical Science, vol. 4, no. 1, pp. 47–53, 1997
  45. Human T-cell Leukemia Virus Type I Tax Masks c-Myc Function through a cAMP-dependent Pathway
    Journal of Biological Chemistry, vol. 271, no. 16, pp. 9730–9738, 1996
  46. HTLV-I and HTLV-II Tax: Differences in Induction of Micronuclei in Cells and Transcriptional Activation of Viral LTRs
    Virology, vol. 217, no. 1, pp. 373–379, 1996
  47. Induction of Micronuclei by HTLV-I Tax: A Cellular Assay for Function
    Virology, vol. 193, no. 1, pp. 456–459, 1993
  48. HTLV-I tax is a zinc-binding protein: Role of zinc in tax structure and function
    Virology, vol. 188, no. 2, pp. 754–764, 1992
  49. Substitution of norleucine for methionine residues in a crustacean pigment-dispersing hormone
    Peptides, vol. 6, no. 3, pp. 491–494, 1985
  50. C-terminal deletion analogs of a crustacean pigment-dispersing hormone
    Peptides, vol. 6, no. 6, pp. 1051–1056, 1985