Personal Home Page

http://www.esat.kuleuven.be/scd/person.php?view=0&persid=15

Articles in Scholarly Journals [Incomplete List]

1. Multiple-vector user profiles in support of knowledge sharing
   Information Sciences, vol. 178, no. 17, pp. 3333–3346, 2008
2. On material transfer agreements and visibility of researchers in biotechnology
   Journal of Informetrics, vol. 2, no. 1, pp. 89–100, 2008
3. Structured nonnegative matrix factorization with applications to hidden Markov realization and clustering
   Linear Algebra and its Applications, 2008
4. Low rank updated LS-SVM classifiers for fast variable selection?
   Neural Networks, vol. 21, no. 2-3, pp. 437–449, 2008
5. Exploring the Operational Characteristics of Inference Algorithms for Transcriptional Networks by Means of Synthetic Data
   Artificial Life, vol. 14, no. 1, pp. 49–63, 2008
6. A Convex Approach to Validation-Based Learning of the Regularization Constant
   IEEE Transactions on Neural Networks, vol. 18, no. 3, pp. 917–920, 2007
7. Unbiased minimum-variance input and state estimation for linear discrete-time systems?
   Automatica, vol. 43, no. 1, pp. 111–116, 2007
8. Unbiased minimum-variance input and state estimation for linear discrete-time systems with direct feedthrough?
   Automatica, vol. 43, no. 5, pp. 934–937, 2007
9. Do material transfer agreements affect the choice of research agendas? The case of biotechnology in Belgium
   Scientometrics, vol. 71, no. 2, pp. 239–269, 2007
10. Efficiently updating and tracking the dominant kernel principal components
    Neural Networks, vol. 20, no. 2, pp. 220–229, 2007
11. Macroscopic models for quantum systems and computers
    Journal of Physics: Conference Series, vol. 70, p. 012001, 2007
12. CALIB: a Bioconductor package for estimating absolute expression levels from two-color microarray data
    Bioinformatics, vol. 23, no. 13, pp. 1700–1701, 2007
13. Mapping biomedical concepts onto the human genome by mining literature on chromosomal aberrations
    Nucleic Acids Research, vol. 35, no. 8, pp. 2533–2543, 2007
14. An adaptive input–output modeling approach for predicting the glycemia of critically ill patients
    Physiological Measurement, vol. 27, no. 11, pp. 1057–1069, 2006
15. Query-driven module discovery in microarray data
    Bioinformatics, vol. 23, no. 19, pp. 2573–2580, 2006
16. Predicting the outcome of pregnancies of unknown location: Bayesian networks with expert prior information compared to logistic regression
    Human Reproduction, vol. 21, no. 7, pp. 1824–1831, 2006
17. Hashing protocol for distilling multipartite Calderbank-Shor-Steane states
    Physical Review A, vol. 73, no. 4, 2006
18. Asymptotic adaptive bipartite entanglement-distillation protocol
    Physical Review A, vol. 73, no. 6, 2006
19. Publisher's Note: Asymptotic adaptive bipartite entanglement-distillation protocol [Phys. Rev. A73, 062337 (2006)]
    Physical Review A, vol. 74, no. 1, 2006
20. Stabilizer state breeding
    Physical Review A, vol. 74, no. 6, 2006
21. A calibration method for estimating absolute expression levels from microarray data
    Bioinformatics, vol. 22, no. 10, pp. 1251–1258, 2006
22. Predicting the prognosis of breast cancer by integrating clinical and microarray data with Bayesian networks
    Bioinformatics, vol. 22, no. 14, pp. e184–e190, 2006
23. Towards mapping library and information science
    Information Processing & Management, vol. 42, no. 6, pp. 1614–1642, 2006
24. Erratum: Gene prioritization through genomic data fusion
    Nature Biotechnology, vol. 24, no. 6, Article ID nbt0606-719d, 1 pages, 2006
25. Gene prioritization through genomic data fusion
    Nature Biotechnology, vol. 24, no. 5, Article ID nbt1203, 7 pages, 2006
26. Fixed-size Least Squares Support Vector Machines: A Large Scale Application in Electrical Load Forecasting
    Computational Management Science, vol. 3, no. 2, pp. 113–129, 2006
27. Additive Regularization Trade-Off: Fusion of Training and Validation Levels in Kernel Methods
    Machine Learning, vol. 62, no. 3, pp. 217–252, 2006
28. A Bayesian nonlinear support vector machine error correction model
    Journal of Forecasting, vol. 25, no. 2, pp. 77–100, 2006
29. Molecular profiling of platinum resistant ovarian cancer: Use of the model in clinical practice
    International Journal of Cancer, vol. 119, no. 6, pp. 1511–1511, 2006
30. Three-dimensional ultrasound assessment of the cervix for predicting time to spontaneous onset of labor and time to delivery in prolonged pregnancy
    Ultrasound in Obstetrics and Gynecology, vol. 28, no. 3, pp. 306–311, 2006
31. New models to predict depth of infiltration in endometrial carcinoma based on transvaginal sonography
    Ultrasound in Obstetrics and Gynecology, vol. 27, no. 6, pp. 664–671, 2006
32. Data assimilation for magnetohydrodynamics systems
    Journal of Computational and Applied Mathematics, vol. 189, no. 1-2, pp. 242–259, 2006
33. Model predictive control for ramp metering of motorway traffic: A case study
    Control Engineering Practice, vol. 14, no. 7, pp. 757–767, 2006
34. Comments on: “Efficient robust constrained model predictive control with a time varying terminal constraint set” by Wan and Kothare
    Systems & Control Letters, vol. 55, no. 7, pp. 618–621, 2006
35. Predicting the clinical behavior of ovarian cancer from gene expression profiles
    International Journal of Gynecological Cancer, vol. 16, no. s1, pp. 147–151, 2006
36. Emerging patterns of cryptic chromosomal imbalance in patients with idiopathic mental retardation and multiple congenital anomalies: a new series of 140 patients and review of published reports
    Journal of Medical Genetics, vol. 43, no. 8, pp. 625–633, 2006
37. BMC Bioinformatics, vol. 7, no. 1, p. 160, 2006
38. BMC Bioinformatics, vol. 7, no. 1, p. 43, 2006
39. Genome Biology, vol. 7, no. 5, p. R37, 2006
40. Molecular Karyotyping: Array CGH Quality Criteria for Constitutional Genetic Diagnosis
    Journal of Histochemistry and Cytochemistry, vol. 53, no. 3, pp. 413–422, 2005
41. Genome Biology, vol. 6, no. 13, p. R113, 2005
42. BMC Bioinformatics, vol. 6, no. 1, p. 124, 2005
43. Independent Test Set Performance in the Prediction of Early Relapse in Ovarian Cancer with Gene Expression Profiles
    Clinical Cancer Research, vol. 11, no. 21, pp. 7958–7959, 2005
44. Short-Term Load Forecasting, Profile Identification, and Customer Segmentation: A Methodology Based on Periodic Time Series
    IEEE Transactions on Power Systems, vol. 20, no. 3, pp. 1622–1630, 2005
45. PKA and Sch9 control a molecular switch important for the proper adaptation to nutrient availability
    Molecular Microbiology, vol. 55, no. 3, pp. 862–880, 2005
46. Application of structured total least squares for system identification and model reduction
    IEEE Transactions on Automatic Control, vol. 50, no. 10, pp. 1490–1500, 2005
47. Subspace identification of Hammerstein systems using least squares support vector machines
    IEEE Transactions on Automatic Control, vol. 50, no. 10, pp. 1509–1519, 2005
48. Kernel based partially linear models and nonlinear identification
    IEEE Transactions on Automatic Control, vol. 50, no. 10, pp. 1602–1606, 2005
49. A prewhitening-induced bound on the identification error in independent component analysis
    IEEE Transactions on Circuits and Systems I: Regular Papers, vol. 52, no. 3, pp. 546–554, 2005
50. Cellular automata models of road traffic
    Physics Reports, vol. 419, no. 1, pp. 1–64, 2005
51. A note on persistency of excitation
    Systems & Control Letters, vol. 54, no. 4, pp. 325–329, 2005
52. Min–max feedback MPC using a time-varying terminal constraint set and comments on “Efficient robust constrained model predictive control with a time-varying terminal constraint set”
    Systems & Control Letters, vol. 54, no. 12, pp. 1143–1148, 2005
53. Subset based least squares subspace regression in RKHS
    Neurocomputing, vol. 63, pp. 293–323, 2005
54. Building sparse representations and structure determination on LS-SVM substrates
    Neurocomputing, vol. 64, pp. 137–159, 2005
55. The differogram: Non-parametric noise variance estimation and its use for model selection
    Neurocomputing, vol. 69, no. 1-3, pp. 100–122, 2005
56. Handling missing values in support vector machine classifiers
    Neural Networks, vol. 18, no. 5-6, pp. 684–692, 2005
57. Combining full text and bibliometric information in mapping scientific disciplines
    Information Processing & Management, vol. 41, no. 6, pp. 1548–1572, 2005
58. Linear dynamic filtering with noisy input and output
    Automatica, vol. 41, no. 1, pp. 167–171, 2005
59. Algorithms for deterministic balanced subspace identification
    Automatica, vol. 41, no. 5, pp. 755–766, 2005
60. Constrained linear MPC with time-varying terminal cost using convex combinations
    Automatica, vol. 41, no. 5, pp. 831–837, 2005
61. Identification of MIMO Hammerstein models using least squares support vector machines
    Automatica, vol. 41, no. 7, pp. 1263–1272, 2005
62. Diagnostic accuracy of varying discriminatory zones for the prediction of ectopic pregnancy in women with a pregnancy of unknown location
    Ultrasound in Obstetrics and Gynecology, vol. 26, no. 7, pp. 770–775, 2005
63. Primal-Dual Monotone Kernel Regression
    Neural Processing Letters, vol. 22, no. 2, pp. 171–182, 2005
64. Comparison of the PhoPQ Regulon in Escherichia coli and Salmonella typhimurium
    Journal of Molecular Evolution, vol. 60, no. 4, pp. 462–474, 2005
65. Assessing computational tools for the discovery of transcription factor binding sites
    Nature Biotechnology, vol. 23, no. 1, Article ID nbt1053, 7 pages, 2005
66. Characterization of the Condensin Component Cnap1 and Protein Kinase Melk as Novel E2F Target Genes Down-regulated by 1,25-Dihydroxyvitamin D3
    Journal of Biological Chemistry, vol. 280, no. 45, pp. 37319–37330, 2005
67. M@CBETH: a microarray classification benchmarking tool
    Bioinformatics, vol. 21, no. 14, pp. 3185–3186, 2005
68. BioMart and Bioconductor: a powerful link between biological databases and microarray data analysis
    Bioinformatics, vol. 21, no. 16, pp. 3439–3440, 2005
69. Invariants of the local Clifford group
    Physical Review A, vol. 71, no. 2, 2005
70. Stabilizer states and Clifford operations for systems of arbitrary dimensions and modular arithmetic
    Physical Review A, vol. 71, no. 4, 2005
71. Local unitary versus local Clifford equivalence of stabilizer states
    Physical Review A, vol. 71, no. 6, 2005
72. Finite set of invariants to characterize local Clifford equivalence of stabilizer states
    Physical Review A, vol. 72, no. 1, 2005
73. TOUCAN 2: the all-inclusive open source workbench for regulatory sequence analysis
    Nucleic Acids Research, vol. 33, no. Web Server, pp. W393–W396, 2005
74. The value of tuberculin skin testing in haemodialysis patients
    Nephrology Dialysis Transplantation, vol. 19, no. 2, pp. 433–438, 2004
75. Local invariants of stabilizer codes
    Physical Review A, vol. 70, no. 3, 2004
76. A genetic algorithm for the detection of new cis-regulatory modules in sets of coregulated genes
    Bioinformatics, vol. 20, no. 12, pp. 1974–1976, 2004
77. Systematic benchmarking of microarray data classification: assessing the role of non-linearity and dimensionality reduction
    Bioinformatics, vol. 20, no. 17, pp. 3185–3195, 2004
78. Importing MAGE-ML format microarray data into BioConductor
    Bioinformatics, vol. 20, no. 18, pp. 3641–3642, 2004
79. Benchmarking Least Squares Support Vector Machine Classifiers
    Machine Learning, vol. 54, no. 1, pp. 5–32, 2004
80. Balancing false positives and false negatives for the detection of differential expression in malignancies
    British Journal of Cancer, Article ID 6602140, 2004
81. Microarray screening for target genes of the proto-oncogene PLAG1
    Oncogene, vol. 23, no. 1, Article ID 1207013, 12 pages, 2004
82. Using literature and data to learn Bayesian networks as clinical models of ovarian tumors
    Artificial Intelligence in Medicine, vol. 30, no. 3, pp. 257–281, 2004
83. On homogeneous least-squares problems and the inconsistency introduced by mis-constraining
    Computational Statistics & Data Analysis, vol. 47, no. 3, pp. 455–465, 2004
84. Computation of the Canonical Decomposition by Means of a Simultaneous Generalized Schur Decomposition
    SIAM Journal on Matrix Analysis and Applications, vol. 26, no. 2, p. 295, 2004
85. BMC Genomics, vol. 5, no. 1, p. 34, 2004
86. The Effects of 1alpha,25-Dihydroxyvitamin D3 on the Expression of DNA Replication Genes
    Journal of Bone and Mineral Research, vol. 19, no. 1, pp. 133–146, 2004
87. Bioinformatics: Organisms from Venus, Technology from Jupiter, Algorithms from Mars
    European Journal of Control, vol. 9, no. 2-3, pp. 237–278, 2003
88. Identification of positive real models in subspace identification by using regularization
    IEEE Transactions on Automatic Control, vol. 48, no. 10, pp. 1843–1847, 2003
89. A formant filtered physical model for wind instruments
    IEEE Transactions on Speech and Audio Processing, vol. 11, no. 1, pp. 36–44, 2003
90. A support vector machine formulation to pca analysis and its kernel version
    IEEE Transactions on Neural Networks, vol. 14, no. 2, pp. 447–450, 2003
91. Comparison and meta-analysis of microarray data: from the bench to the computer desk
    Trends in Genetics, vol. 19, no. 10, pp. 570–577, 2003
92. A QR-type reduction for computing the SVD of a general matrix product/quotient
    Numerische Mathematik, vol. 95, no. 1, pp. 101–121, 2003
93. On a cepstral norm for an ARMA model and the polar plot of the logarithm of its transfer function
    Signal Processing, vol. 83, no. 2, pp. 439–443, 2003
94. Constraints in channel shortening equalizer design for DMT-based systems
    Signal Processing, vol. 83, no. 3, pp. 641–648, 2003
95. Bayesian applications of belief networks and multilayer perceptrons for ovarian tumor classification with rejection
    Artificial Intelligence in Medicine, vol. 29, no. 1-2, pp. 39–60, 2003
96. Genome-specific higher-order background models to improve motif detection
    Trends in Microbiology, vol. 11, no. 2, pp. 61–66, 2003
97. Gene profiling of hippocampal neuronal culture
    Journal of Neurochemistry, vol. 85, no. 5, pp. 1279–1288, 2003
98. MARAN: normalizing micro-array data
    Bioinformatics, vol. 19, no. 7, pp. 893–894, 2003
99. Computational detection of cis -regulatory modules
    Bioinformatics, vol. 19, no. 90002, pp. 5ii–14, 2003
100. Biclustering microarray data by Gibbs sampling
     Bioinformatics, vol. 19, no. 90002, pp. 196ii–205, 2003
101. Toucan: deciphering the cis-regulatory logic of coregulated genes
     Nucleic Acids Research, vol. 31, no. 6, pp. 1753–1764, 2003
102. INCLUSive: a web portal and service registry for microarray and regulatory sequence analysis
     Nucleic Acids Research, vol. 31, no. 13, pp. 3468–3470, 2003
103. A Gibbs Sampling Method to Detect Overrepresented Motifs in the Upstream Regions of Coexpressed Genes
     Journal of Computational Biology, vol. 9, no. 2, pp. 447–464, 2002
104. INCLUSive: INtegrated Clustering, Upstream sequence retrieval and motif Sampling
     Bioinformatics, vol. 18, no. 2, pp. 331–332, 2002
105. Adaptive quality-based clustering of gene expression profiles
     Bioinformatics, vol. 18, no. 5, pp. 735–746, 2002
106. On the geometry of entangled states
     Journal of Modern Optics, vol. 49, no. 8, pp. 1277–1287, 2002
107. An algorithm including results of gray-scale and power Doppler ultrasound examination to predict endometrial malignancy in women with postmenopausal bleeding
     Ultrasound in Obstetrics and Gynecology, vol. 20, no. 4, pp. 370–376, 2002
108. Neural Processing Letters, vol. 15, no. 1, pp. 45–58, 2002
109. Subspace angles between ARMA models
     Systems & Control Letters, vol. 46, no. 4, pp. 265–270, 2002
110. The structured total least-squares approach for non-linearly structured matrices
     Numerical Linear Algebra with Applications, vol. 9, no. 4, pp. 321–332, 2002
111. Functional bioinformatics of microarray data: from expression to regulation
     Proceedings of the IEEE, vol. 90, no. 11, pp. 1722–1743, 2002
112. The QR Decomposition and the Singular Value Decomposition in the Symmetrized Max-Plus Algebra Revisited
     SIAM Review, vol. 44, no. 3, p. 417, 2002
113. Journal of Biological Systems, vol. 10, no. 4, p. 409, 2002
114. Bayesian Framework for Least-Squares Support Vector Machine Classifiers, Gaussian Processes, and Kernel Fisher Discriminant Analysis
     Neural Computation, vol. 14, no. 5, pp. 1115–1147, 2002
115. Gebruik van microroosters in de klinische oncologie
     Tijdschrift voor Geneeskunde, vol. 57, no. 18, pp. 1225–1236, 2001
116. On Frequency Weighted Balanced Truncation: Hankel Singular Values and Error Bounds
     European Journal of Control, vol. 7, no. 6, pp. 584–592, 2001
117. International Journal of Bifurcation and Chaos [in Applied Sciences and Engineering], vol. 11, no. 8, p. 2133, 2001
118. Financial time series prediction using least squares support vector machines within the evidence framework
     IEEE Transactions on Neural Networks, vol. 12, no. 4, pp. 809–821, 2001
119. Independent component analysis and (simultaneous) third-order tensor diagonalization
     IEEE Transactions on Signal Processing, vol. 49, no. 10, pp. 2262–2271, 2001
120. Identification of stable models in subspace identification by using regularization
     IEEE Transactions on Automatic Control, vol. 46, no. 9, pp. 1416–1420, 2001
121. Knowledge discovery in a direct marketing case using least squares support vector machines
     International Journal of Intelligent Systems, vol. 16, no. 9, pp. 1023–1036, 2001
122. Misfit versus latency
     Automatica, vol. 37, no. 12, pp. 2057–2067, 2001
123. IQML-like algorithms for solving structured total least squares problems: a unified view
     Signal Processing, vol. 81, no. 9, pp. 1935–1945, 2001
124. A high performance model predictive controller: application on a polyethylene gas phase reactor
     Control Engineering Practice, vol. 9, no. 8, pp. 829–835, 2001
125. Optimal control by least squares support vector machines
     Neural Networks, vol. 14, no. 1, pp. 23–35, 2001
126. Journal of Physics A: Mathematical and General, vol. 34, no. 47, pp. 10327–10332, 2001
127. A higher-order background model improves the detection of promoter regulatory elements by Gibbs sampling
     Bioinformatics, vol. 17, no. 12, pp. 1113–1122, 2001
128. Fetal electrocardiogram extraction by blind source subspace separation
     IEEE Transactions on Biomedical Engineering, vol. 47, no. 5, pp. 567–572, 2000
129. Rational approximation in linear systems and control
     Journal of Computational and Applied Mathematics, vol. 121, no. 1-2, pp. 355–378, 2000
130. Acta Applicandae Mathematicae, vol. 61, no. 1/3, pp. 317–331, 2000
131. Subspace state space system identification for industrial processes
     Journal of Process Control, vol. 10, no. 2-3, pp. 149–155, 2000
132. On a variational formulation of the QSVD and the RSVD
     Linear Algebra and its Applications, vol. 311, no. 1-3, pp. 61–78, 2000
133. On the nonuniqueness of the factorization factors in the product singular value decomposition
     Linear Algebra and its Applications, vol. 314, no. 1-3, pp. 191–203, 2000
134. An introduction to independent component analysis
     Journal of Chemometrics, vol. 14, no. 3, pp. 123–149, 2000
135. Robust local stability of multilayer recurrent neural networks
     IEEE Transactions on Neural Networks, vol. 11, no. 1, pp. 222–229, 2000
136. A Multilinear Singular Value Decomposition
     SIAM Journal on Matrix Analysis and Applications, vol. 21, no. 4, p. 1253, 2000
137. On the Computation of the Restricted Singular Value Decomposition via the Cosine-Sine Decomposition
     SIAM Journal on Matrix Analysis and Applications, vol. 22, no. 2, p. 580, 2000
138. On the Best Rank-1 and Rank-(R1,R2,. . .,RN) Approximation of Higher-Order Tensors
     SIAM Journal on Matrix Analysis and Applications, vol. 21, no. 4, p. 1324, 2000
139. Lur'e systems with multilayer perceptron and recurrent neural networks: absolute stability and dissipativity
     IEEE Transactions on Automatic Control, vol. 44, no. 4, pp. 770–774, 1999
140. Subspace identification of bilinear systems subject to white inputs
     IEEE Transactions on Automatic Control, vol. 44, no. 6, pp. 1157–1165, 1999
141. Recursive estimation based on the equality-constrained optimization for intersection origin–destination matrices
     Transportation Research Part B: Methodological, vol. 33, no. 3, pp. 203–214, 1999
142. Artificial neural network models for the preoperative discrimination between malignant and benign adnexal masses
     Ultrasound in Obstetrics and Gynecology, vol. 13, no. 1, pp. 17–25, 1999
143. A family of adaptive robust estimates based on the symmetrical generalized logistic distribution
     Communications in Statistics - Theory and Methods, vol. 28, no. 6, pp. 1293–1310, 1999
144. More on local influence in pllincipal components analysis
     Communications in Statistics - Theory and Methods, vol. 28, no. 10, pp. 2487–2495, 1999
145. The Linear Dynamic Complementarity Problem is a special case of the Extended Linear Complementarity Problem
     Systems & Control Letters, vol. 34, no. 1-2, pp. 63–75, 1998
146. On the boolean minimal realization problem in the max-plus algebra
     Systems & Control Letters, vol. 35, no. 2, pp. 69–78, 1998
147. A corrected normal approximation for the Student's t distribution
     Computational Statistics & Data Analysis, vol. 29, no. 2, pp. 213–216, 1998
148. COMPARISON STUDY OF SUBSPACE IDENTIFICATION METHODS APPLIED TO FLEXIBLE STRUCTURES
     Mechanical Systems and Signal Processing, vol. 12, no. 5, pp. 679–692, 1998
149. An absolute stability criterion for the Lur'e problem with sector and slope restricted nonlinearities
     IEEE Transactions on Circuits and Systems I: Fundamental Theory and Applications, vol. 45, no. 9, pp. 1007–1009, 1998
150. The QR Decomposition and the Singular Value Decomposition in the Symmetrized Max-Plus Algebra
     SIAM Journal on Matrix Analysis and Applications, vol. 19, no. 2, p. 378, 1998
151. NL/sub q/ theory: checking and imposing stability of recurrent neural networks for nonlinear modeling
     IEEE Transactions on Signal Processing, vol. 45, no. 11, pp. 2682–2691, 1997
152. Calculation of the structured singular value with gradient-based optimization algorithms on a Lie group of structured unitary matrices
     IEEE Transactions on Automatic Control, vol. 42, no. 11, pp. 1596–1600, 1997
153. The singular-value decomposition in the extended max algebra
     Linear Algebra and its Applications, vol. 250, pp. 143–176, 1997
154. A note on the characteristic equation in the max-plus algebra
     Linear Algebra and its Applications, vol. 261, no. 1-3, pp. 237–250, 1997
155. A note on the characteristic equation in the max-plus algebra
     Linear Algebra and its Applications, vol. 261, pp. 237–250, 1997
156. A subspace algorithm