Research Article
HMEC: A Heuristic Algorithm for Individual Haplotyping with Minimum Error Correction
Table 3
Reconstruction rate and running time of HapCUT and HMEC with 10% coverage on HuRef data.
| Error rate | HapCUT | HMEC | Reconstruction rate | Time (sec) | Reconstruction rate | Time (sec) |
| 10 | 0.988 | 76.081 | 0.966 | 0.141 | 15 | 0.954 | 90.206 | 0.948 | 0.154 | 20 | 0.953 | 81.169 | 0.957 | 0.144 | 25 | 0.952 | 74.924 | 0.923 | 0.142 | 30 | 0.951 | 81.828 | 0.893 | 0.177 | 40 | 0.934 | 69.748 | 0.814 | 0.169 |
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