Research Article
HMEC: A Heuristic Algorithm for Individual Haplotyping with Minimum Error Correction
Table 4
Reconstruction rate and running time of HapCUT and HMEC with 25% coverage on HuRef data.
| Error rate | HapCUT | HMEC | Reconstruction rate | Time (sec) | Reconstruction rate | Time (sec) |
| 10 | 0.988 | 184.642 | 1.000 | 0.156 | 15 | 0.988 | 171.698 | 1.000 | 0.167 | 20 | 0.988 | 134.406 | 0.998 | 0.163 | 25 | 0.988 | 133.966 | 0.998 | 0.155 | 30 | 0.987 | 136.572 | 0.996 | 0.172 | 40 | 0.985 | 171.334 | 0.960 | 0.161 |
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