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Research Article

HMEC: A Heuristic Algorithm for Individual Haplotyping with Minimum Error Correction

Table 7

Comparison of different haplotyping techniques using ReHap. Min Len = 3, Max Len = 7, coverage = 8. Highest reconstruction rate for each error rate is shown in bold.
Error rate SpeedHap FastHare MLF 2-Distance MEC SHR HMEC HapCUT
0.2 1 0.91 1 1 0.65 1 0.9
0.3 0.935 0.7 0.945 0.61 0.685 0.965 0.82
0.4 0.605 0.78 0.78 0.68 0.55 0.535 0.81
0.5 0.535 0.48 0.485 0.505 0.526 0.525 0.58