Table 2: Comparison of the lowest lRMSDs obtained by BH to those obtained by other methods. Systems that are CAPRI targets are denoted by an asterisk.

Number PDB ID
(chains)
Size BH (Å) [66] (Å) [91] (Å)

1 1c1y (A,B) 1376, 658 1.8 1.2 N/A
2 1ds6 (A,B) 1413, 1426 3.4 1.2 N/A
3 1tx4 (A,B) 1579, 1378 2.4 1.4 N/A
4 1www (W,Y) 862, 782 2.6 11.4 N/A
5 1flt (V,Y) 770, 758 2.7 1.5 N/A
6 1vcb (A,B) 755, 692 3.4 0.8 N/A
7 1vcb (B,C) 692, 1154 2.7 13.1 N/A
8 1ohz (A,B) 1027, 416 2.7 1.7 0.6
9 1t6g (A,C) 2628, 1394 3.6 1.7 3.8
10 1zhi (A,B) 1597, 1036 4.6 25.3 3.4
11 2hqs (A,C) 3127, 856 2.6 29.1 2.5
12 1qav (A,B) 663, 840 2.6 1.4 N/A
13 1g4y (B,R) 682, 1156 4.1 0.8 N/A
14 1cse (E,I) 1920, 522 2.4 0.7 N/A
15 1g4u (R,S) 1398, 2790 3.2 1.0 N/A