Research Article
A Signal Processing Method to Explore Similarity in Protein Flexibility
Table 1
Distances calculated using IDF and hydrophobicity signals.
(a) |
| Aligned IDF signal distances |
| TRX | | 1EP7 | 1FB6 | 1THX |
| 1EP7 | * | 0.005253 | 0.007149 | 1FB6 | 0.005253 | * | 0.009897 | 1THX | 0.007149 | 0.009897 | * |
| CheY | | 1TMY | 2CHE | 3CHY |
| 1TMY | * | 0.003924 | 0.008473 | 2CHE | 0.003924 | * | 0.011775 | 3CHY | 0.008473 | 0.011775 | * |
| CaM | | 1EXR | 1NIW | 1RFJ |
| 1EXR | * | 0.022749 | 0.028437 | 1NIW | 0.022749 | * | 0.024646 | 1RFJ | 0.028437 | 0.024646 | * |
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(b) |
| Aligned hydrophobicity signal distances |
| TRX | | 1EP7 | 1FB6 | 1THX |
| 1EP7 | * | 20731.11 | 18421.28 | 1FB6 | 20731.11 | * | 17714.09 | 1THX | 18421.28 | 17714.09 | * |
| CheY | | 1TMY | 2CHE | 3CHY |
| 1TMY | * | 17146.56 | 0.222448 | 2CHE | 0.108108 | * | 0.108108 | 3CHY | 0.222448 | 0.108108 | * |
| CaM | | 1EXR | 1NIW | 1RFJ |
| 1EXR | * | 3846.10 | 4308.31 | 1NIW | 3846.10 | * | 3848.70 | 1RFJ | 4308.31 | 3848.70 | * |
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