NovelSNPer: A Fast Tool for the Identification and Characterization of Novel SNPs and InDels

Table 5

Ambiguous short indels. Multiple deletion annotation on human chromosome 12. The deleted nucleotide A is underlined in the reference sequence. In the new sequence a gap at the position of the deletion is shown.

Name	Position	refAllele	Allele	Reference sequence	Alternative sequence
rs71918324	6551619	A	—	TCTCAAAAAAAAAAAAAAAAAAAAGAAC	TCTC AAAAAAAAAAAAAAAAAAAGAAC
rs71702364	6551627	A	—	TCTCAAAAAAAAAAAAAAAAAAAAGAAC	TCTCAAAAAAAA AAAAAAAAAAAGAAC
rs5796236	6551628	A	—	TCTCAAAAAAAAAAAAAAAAAAAAGAAC	TCTCAAAAAAAAA AAAAAAAAAAGAAC
rs35226411	6551629	A	—	TCTCAAAAAAAAAAAAAAAAAAAAGAAC	TCTCAAAAAAAAAA AAAAAAAAAGAAC
rs72397401	6551630	A	—	TCTCAAAAAAAAAAAAAAAAAAAAGAAC	TCTCAAAAAAAAAAA AAAAAAAAGAAC
rs35471040	6551638	A	—	TCTCAAAAAAAAAAAAAAAAAAAAGAAC	TCTCAAAAAAAAAAAAAAAAAAA GAAC