Table 7: Bovine variations in various genomic regions. Distribution of variations found in the bovine genome in an NGS experiment. The sum of the percentage is higher than 100%, because some variations are in several transcripts and can therefore be allocated to multiple regions.

Region Number Percentage

INTERGENIC 1,485,588 64.36%
INTRONIC 647,129 28.04%
UPSTREAM 73,996 3.21%
DOWNSTREAM 73,512 3.18%
CODING_REGION 20,856 0.90%
3PRIME_UTR 6,019 0.26%
SPLICE_SITE 2,364 0.10%
5PRIME_UTR 1,303 0.06%
WITHIN_NONCODING_TRANSCRIPT 786 0.03%
ESSENTIAL_SPLICE_SITE 133 0.01%