Research Article

ModEnzA: Accurate Identification of Metabolic Enzymes Using Function Specific Profile HMMs with Optimised Discrimination Threshold and Modified Emission Probabilities

Figure 2

ROC curves for genome-wide enzyme identification using the ModEnzA profiles. The classification of the complete genomes of the four organisms is shown in (a). A fraction of the EC number profiles (284 out of 2075 Tier I ModEnzA profiles) were retrained with an older version of the ENZYME database and compared to PRIAM and MetaShark (b). ModEnzA-RT-Retrained ModEnzA profiles.
743782.fig.002a
(a)
743782.fig.002b
(b)