Research Article

A Topology-Based Metric for Measuring Term Similarity in the Gene Ontology

Table 3

Area under ROC curves (AUCs) and precision for the human PPI dataset. For each group, the top score is in bold.

ApproachesArea under curve (AUC)PrecisionAccuracy
Excluding IEAIncluding IEAExcluding IEAIncluding IEAExcluding IEAIncluding IEA

GO-universal0.9620.9540.8410.7720.8850.816
Resnik 0.933 0.931 0.724 0.701 0.713 0.739
Lin 0.763 0.691 0.610 0.568 0.481 0.549

SimUIC0.9830.9860.930 0.9160.9770.979
SimGIC0.9830.986 0.9220.917 0.974 0.974
SimUI 0.975 0.978 0.866 0.845 0.926 0.937