Gene Regulation, Modulation, and Their Applications in Gene Expression Data Analysis

Table 3

Top 18 candidate ceRNAs for ESR1 as GOI obtained from TraceRNA. ESR1 is at rank of 174 (not listed in this table).

Gene symbol	SVMicrO-based prediction		Expression correlation		Final score
	Score	𝑃 value	Score	𝑃 value
FOXP1	1.066	0.0043	0.508	0.016	1212
VEZF1	0.942	0.0060	0.4868	0.020	1179
NOVA1	0.896	0.0067	0.479	0.023	1160
CPEB3	0.858	0.0074	0.484	0.022	1149
MAP2K4	0.919	0.0064	0.322	0.097	1139
FAM120A	0.885	0.0069	0.341	0.082	1130
PCDHA3	0.983	0.0054	0.170	0.215	1125
SIRT1	0.927	0.0062	0.230	0.162	1117
PCDHA5	0.983	0.0054	0.148	0.233	1113
PTEN	0.898	0.0067	0.221	0.168	1104
PCDHA1	0.983	0.0054	0.140	0.239	1103
NBEA	0.752	0.0098	0.491	0.020	1102
ZFHX4	0.970	0.0056	0.154	0.229	1097
GLCE	0.798	0.0087	0.3231	0.096	1096
MAGI2	0.777	0.0092	0.321	0.097	1086
SATB2	0.801	0.0086	0.243	0.151	1078
LEF1	0.753	0.0098	0.291	0.112	1065
ATPBD4	0.819	0.0082	0.170	0.215	1060