Semantic Annotation for Biological Information Retrieval System

Table 1

The normalized GO and the created index description.

	Table name	Variable name	Variable description
Gene ontology normalized database	Component	CID	Cellular component Term ID
		CName	Cellular component name
	Function	FID	Molecular function Term ID
		FName	Molecular function name
	Process	PID	Biological process Term ID
		PName	Biological process name
	Relation	RID	Relation ID (auto number)
		GID	Gene ID (Term ID in GO)
		ParentID	Parent Term ID
		ParentName	Parent term name
		RType	Relation type (is_a, part_of, has_part, regulates)
	Synonym	SID	Synonym ID (auto number)
		GID	Gene ID (Term ID in GO)
		SName	Synonym name
		SType	Synonym type (EXACT, NARROW, BROAD, RELATD)
Annotated index	Paper	PaperID	Paper ID (paper name)
		PaperTitle	Paper title
		PaperAuthor	Paper author
	Term	PaperID	Paper ID (paper name)
		TermName	Term name
		TermType	Term type
		TermFreq	Term frequency