In Silico Analysis of Gene Expression Network Components Underlying Pigmentation Phenotypes in the Python Identified Evolutionarily Conserved Clusters of Transcription Factor Binding Sites
Table 3
InterPro domain annotation for pigmentation associated python transcription factors.
Gene
Protein name
StartPos
EndPos
DomainId
Domain name
CREB
cAMP response element-binding protein
87
146
IPR003102
Coactivator CBP, pKID
CREB
cAMP response element-binding protein
284
342
IPR004827
Basic-leucine zipper domain
FOXD3
Forkhead box D3
71
173
IPR011991
Winged helix-turn-helix DNA binding domain
LEF-1
Lymphoid enhancer-binding factor 1
1
65
IPR027397
Catenin binding domain
LEF-1
Lymphoid enhancer-binding factor 1
1
209
IPR013558
CTNNB1 binding, N-terminal
LEF-1
Lymphoid enhancer-binding factor 1
293
375
IPR009071
High mobility group box domain
MITF
Microphthalmia-associated transcription factor
303
370
IPR011598
Myc-type, basic helix-loop-helix (bHLH) domain
MITF
Microphthalmia-associated transcription factor
393
519
IPR021802
MiT/TFE transcription factors, C-terminal
MITF
Microphthalmia-associated transcription factor
4
142
IPR031867
MiT/TFE transcription factors, N-terminal
POU3F2
POU Class 3 Homeobox 2
51
125
IPR000327
POU-specific domain
POU3F2
POU Class 3 Homeobox 2
125
205
IPR009057
Homeodomain-like
USF-1
Upstream transcription factor 1
193
286
IPR011598
Myc-type, basic helix-loop-helix (bHLH) domain
Start and end positions are provided for each domain detected in the transcription factor protein sequences.