Research Article

An Optimal Seed Based Compression Algorithm for DNA Sequences

Table 1

Structure of the offline dictionary.

Extended seedType of repeatPosition of repeatLengthMismatch details

AATAACTTG Approx59ā€‰
Reverse209(1 10 01, 8 10 00)

AACTTGReverse366ā€‰
Approx737(4 01 10)