Multiphase Simulated Annealing Based on Boltzmann and Bose-Einstein Distribution Applied to Protein Folding Problem

Algorithm 5

Pseudocode of BEAP phase.

(1) BEAP Phase( )

(2) Begin

(3)   = Threshold value; Determine

(4)   = value very close to zero

(5)   = initial value

(6)   = Value calculated by analytical method

(7)  CM = Initial value

(8)  While () do

(9)    

(10)     while () do

(11)        = perturbation system()

(12)       

(13)       If () then

(14)       

(15)      ElseIf (( then

(16)      

(17)      End if

(18)      

(19)  end while

(20)   or

(21)  End while

(22) End