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Citations to this Journal [846 citations: 101–200 of 815 articles]

Articles published in Advances in Bioinformatics have been cited 846 times. The following is a list of the 815 articles that have cited the articles published in Advances in Bioinformatics.

  • Mukesh Kumar, and Santanu Kumar Rath, “Classification of Microarray Data Using Kernel Fuzzy Inference System,” International Scholarly Research Notices, vol. 2014, pp. 1–18, 2014. View at Publisher · View at Google Scholar
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  • Kamel Deramchia, Pauline Morand, Marc Biran, Yoann Millerioux, Muriel Mazet, Marion Wargnies, Jean-Michel Franconi, and Frederic Bringaud, “Contribution of Pyruvate Phosphate Dikinase in the Maintenance of the Glycosomal ATP/ADP Balance in the Trypanosoma brucei Procyclic Form,” Journal of Biological Chemistry, vol. 289, no. 25, pp. 17365–17378, 2014. View at Publisher · View at Google Scholar
  • Gurkan Korkmaz, Mikael Holm, Tobias Wiens, and Suparna Sanyal, “Comprehensive Analysis of Stop Codon Usage in Bacteria and Its Correlation with Release Factor Abundance,” Journal of Biological Chemistry, vol. 289, no. 44, pp. 30334–30342, 2014. View at Publisher · View at Google Scholar
  • Matthias Zwick, “Automated Curation of Gene Name Normalization Results Using the Konstanz Information Miner,” Journal of Biomedical Informatics, 2014. View at Publisher · View at Google Scholar
  • Kristin Kassler, and Heinrich Sticht, “Molecular mechanism of HIV-1 gp120 mutations that reduce CD4 binding affinity,” Journal of Biomolecular Structure & Dynamics, vol. 32, no. 1, pp. 52–64, 2014. View at Publisher · View at Google Scholar
  • Iris E. Andernach, Lukas V. Leiss, Zekiba S. Tarnagda, Marc C. Tahita, Jesse A. Otegbayo, Joseph C. Forbi, Sunday Omilabu, Ionela Gouandjika-Vasilache, Narcisse P. Komas, Okwen P. Mbah, and Claude P. Muller, “Characterization of Hepatitis Delta Virus in Sub-Saharan Africa,” Journal of Clinical Microbiology, vol. 52, no. 5, pp. 1629–1636, 2014. View at Publisher · View at Google Scholar
  • Yunzhang Huo, and Ping Ji, “Continuous-Time Markov Chain–Based Flux Analysis in Metabolism,” Journal of Computational Biology, pp. 140804115457004, 2014. View at Publisher · View at Google Scholar
  • Loni Philip Tabb, Wei Zhao, Jingyu Huang, and Gail L. Rosen, “ Characterizing the Empirical Distribution of Prokaryotic Genome n -mers in the Presence of Nullomers ,” Journal of Computational Biology, pp. 140730134132000, 2014. View at Publisher · View at Google Scholar
  • Huiying Zhao, Yuedong Yang, Mark von Itzstein, and Yaoqi Zhou, “Carbohydrate-binding protein identification by coupling structural similarity searching with binding affinity prediction,” Journal of Computational Chemistry, 2014. View at Publisher · View at Google Scholar
  • Ellen H. Colebrook, Stephen G. Thomas, and Andrew L. Phillips, “The role of gibberellin signalling in plant responses to abiotic stress,” Journal of Experimental Biology, vol. 217, no. 1, pp. 67–75, 2014. View at Publisher · View at Google Scholar
  • Maria Derkacheva, and Lars Hennig, “Variations on a theme: Polycomb group proteins in plants,” Journal of Experimental Botany, vol. 65, no. 10, pp. 2769–2784, 2014. View at Publisher · View at Google Scholar
  • Wataru Sakamoto, and Tsuneaki Takami, “Nucleases in higher plants and their possible involvement in DNA degradation during leaf senescence,” Journal of Experimental Botany, vol. 65, no. 14, pp. 3835–3843, 2014. View at Publisher · View at Google Scholar
  • Jorge Gutierrez, Sergio Gonzalez-Perez, Francisco Garcia-Garcia, Cara T. Daly, Oscar Lorenzo, Jose L. Revuelta, Paul F. McCabe, and Juan B. Arellano, “Programmed cell death activated by Rose Bengal in Arabidopsis thaliana cell suspension cultures requires functional chloroplasts,” Journal of Experimental Botany, vol. 65, no. 12, pp. 3081–3095, 2014. View at Publisher · View at Google Scholar
  • Margaret Simons, Rajib Saha, Lenaig Guillard, Gilles Clement, Patrick Armengaud, Rafael Canas, Costas D. Maranas, Peter J. Lea, and Bertrand Hirel, “Nitrogen-use efficiency in maize (Zea mays L.): from 'omics' studies to metabolic modelling,” Journal of Experimental Botany, vol. 65, no. 19, pp. 5657–5671, 2014. View at Publisher · View at Google Scholar
  • Camille Chardin, Thomas Girin, Francois Roudier, Christian Meyer, and Anne Krapp, “The plant RWP-RK transcription factors: key regulators of nitrogen responses and of gametophyte development,” Journal of Experimental Botany, vol. 65, no. 19, pp. 5577–5587, 2014. View at Publisher · View at Google Scholar
  • Fabien Senechal, Christopher Wattier, Christine Rusterucci, and Jerome Pelloux, “Homogalacturonan-modifying enzymes: structure, expression, and roles in plants,” Journal of Experimental Botany, vol. 65, no. 18, pp. 5125–5160, 2014. View at Publisher · View at Google Scholar
  • Adam J. Richards, Janet Staats, Jennifer Enzor, Katherine McKinnon, Jacob Frelinger, Thomas N. Denny, Kent J. Weinhold, and Cliburn Chan, “Setting objective thresholds for rare event detection in flow cytometry,” Journal of Immunological Methods, 2014. View at Publisher · View at Google Scholar
  • Xianwen Wang, Feng Chen, Zhi Cheng, Yaohua Du, and Taihu Wu, “AUTOMATED GATING OF PORTABLE CYTOMETER DATA BASED ON SKEW t MIXTURE MODELS,” Journal of Mechanics in Medicine and Biology, pp. 1550033, 2014. View at Publisher · View at Google Scholar
  • Miguel Angel Rodrigo Merlos, Ondrej Zitka, Sona Krizkova, Amitava Moulick, Vojtech Adam, and Rene Kizek, “MALDI-TOF MS as evolving cancer diagnostic tool: A review,” Journal of Pharmaceutical and Biomedical Analysis, 2014. View at Publisher · View at Google Scholar
  • Penelope A. Morel, James R. Faeder, William F. Hawse, and Natasa Miskov-Zivanov, “Modeling the T cell immune response: a fascinating challenge,” Journal of Pharmacokinetics and Pharmacodynamics, 2014. View at Publisher · View at Google Scholar
  • Qingsong Gao, Hui Zang, Yun Gao, Zefeng Yang, Yong Zhou, Yuming Luo, Yuan Yuan, Yifan Wang, Liming Yang, Xing Xu, Jun Wang, Chenwu Xu, and Guohua Liang, “Comprehensive molecular evolution and gene expression analyses of the ABC1 atypical kinase family in rice and Arabidopsis,” Journal of Plant Biochemistry and Biotechnology, 2014. View at Publisher · View at Google Scholar
  • J. Van Hove, K. Stefanowicz, K. De Schutter, L. Eggermont, N. Lannoo, B. Al Atalah, and E. J. M. Van Damme, “Transcriptional profiling of the lectin ArathEULS3 from Arabidopsis thaliana toward abiotic stresses,” Journal Of Plant Physiology, vol. 171, no. 18, pp. 1763–1773, 2014. View at Publisher · View at Google Scholar
  • Anni P. Vehmas, Dorota Muth-Pawlak, Kaisa Huhtinen, Taija Saloniemi-Heinonen, Kimmo Jaakkola, Teemu D. Laajala, Heidi Kaprio, Pia A. Suvitie, Tero Aittokallio, Harri Siitari, Antti Perheentupa, Matti Poutanen, and Garry L. Corthals, “Ovarian Endometriosis Signatures Established through Discovery and Directed Mass Spectrometry Analysis,” Journal of Proteome Research, pp. 140820124517002, 2014. View at Publisher · View at Google Scholar
  • Yulan Wang, Xuefeng Xu, Hong Liu, and Fuhai Ji, “Effects of Dexmedetomidine on Patients Undergoing Radical Gastrectomy,” Journal of Surgical Research, 2014. View at Publisher · View at Google Scholar
  • Sen Li, and Jie Yang, “System analysis of synonymous codon usage biases in Archaeal Virus genomes,” Journal of Theoretical Biology, 2014. View at Publisher · View at Google Scholar
  • Tilahun Melak, and Sunita Gakkhar, “Potential non homologous protein targets of mycobacterium tuberculosis H37Rv identified from protein-protein interaction network,” Journal of Theoretical Biology, 2014. View at Publisher · View at Google Scholar
  • B. T. Sy, H. M. Nguyen, N. L. Toan, L. H. Song, H. V. Tong, C. Wolboldt, V. Q. Binh, P. G. Kremsner, T. P. Velavan, and C.-T. Bock, “Identification of a natural intergenotypic recombinant hepatitis delta virus genotype 1 and 2 in Vietnamese HBsAg-positive patients,” Journal of Viral Hepatitis, 2014. View at Publisher · View at Google Scholar
  • Priya Raja, Jamie N. Jackel, Sizhun Li, Isaac M. Heard, and David M. Bisaro, “Arabidopsis Double-Stranded RNA Binding Protein DRB3 Participates in Methylation-Mediated Defense against Geminiviruses,” Journal of Virology, vol. 88, no. 5, pp. 2611–2622, 2014. View at Publisher · View at Google Scholar
  • Welkin H. Pope, Kirk R. Anders, Madison Baird, Charles A. Bowman, Michelle M. Boyle, Gregory W. Broussard, Tiffany Chow, Kari L. Clase, Shannon Cooper, Kathleen A. Cornely, Randall J. DeJong, Veronique A. Delesalle, Lisa Deng, David Dunbar, Nicholas P. Edgington, Christina M. Ferreira, Kathleen Weston Hafer, Grant A. Hartzog, J. Robert Hatherill, Lee E. Hughes, Khristina Ipapo, Greg P. Krukonis, Christopher G. Meier, Denise L. Monti, Matthew R. Olm, Shallee T. Page, Craig L. Peebles, Claire A. Rinehart, Michael R. Rubin, Daniel A. Russell, Erin R. Sanders, Morgan Schoer, Christopher D. Shaffer, James Wherley, Edwin Vazquez, Han Yuan, Daiyuan Zhang, Steven G. Cresawn, Deborah Jacobs-Sera, Roger W. Hendrix, and Graham F. Hatfull, “Cluster M Mycobacteriophages Bongo, PegLeg, and Rey with Unusually Large Repertoires of tRNA Isotypes,” Journal of Virology, vol. 88, no. 5, pp. 2461–2480, 2014. View at Publisher · View at Google Scholar
  • Welkin H. Pope, Deborah Jacobs-Sera, Daniel A. Russell, Daniel H. F. Rubin, Afsana Kajee, Zama N. P. Msibi, Michelle H. Larsen, William R. Jacobs, Jeffrey G. Lawrence, Roger W. Hendrix, and Graham F. Hatfull, “ Genomics and Proteomics of Mycobacteriophage Patience, an Accidental Tourist in the Mycobacterium Neighborhood ,” mBio, vol. 5, no. 6, pp. e02145-14, 2014. View at Publisher · View at Google Scholar
  • Joanna Przybyl, Katarzyna Kozak, Hanna Kosela, Slawomir Falkowski, Tomasz Switaj, Iwona Lugowska, Anna Szumera-Cieckiewicz, Konrad Ptaszynski, Beata Grygalewicz, Magdalena Chechlinska, Barbara Pienkowska-Grela, Maria Debiec-Rychter, Janusz A. Siedlecki, and Piotr Rutkowski, “Gene expression profiling of peripheral blood cells: new insights into Ewing sarcoma biology and clinical applications,” Medical Oncology, vol. 31, no. 8, 2014. View at Publisher · View at Google Scholar
  • Michael Reiter, Jana Hoffmann, Florian Kleber, Angela Schumich, Gerald Peter, Florian Kromp, Martin Kampel, and Michael Dworzak, “Towards automation of flow cytometric analysis for quality-assured follow-up assessment to guide curative therapy for acute lymphoblastic leukaemia in children,” memo - Magazine of European Medical Oncology, 2014. View at Publisher · View at Google Scholar
  • Chien-Ming Chen, Yu-Lun Lu, Chi-Pong Sio, Guan-Chung Wu, Wen-Shyong Tzou, and Tun-Wen Pai, “Gene Ontology Based Housekeeping Gene Selection for RNA-seq Normalization,” Methods, 2014. View at Publisher · View at Google Scholar
  • Theodoros G. Soldatos, Nelson Perdigão, Nigel P. Brown, Kenneth S. Sabir, and Seán I. O’Donoghue, “How to learn about gene function: text-mining or ontologies?,” Methods, 2014. View at Publisher · View at Google Scholar
  • Mi-Young Lee, Carlos S. Moreno, and Harold I. Saavedra, “E2F Activators Signal and Maintain Centrosome Amplification in Breast Cancer Cells,” Molecular and Cellular Biology, vol. 34, no. 14, pp. 2581–2599, 2014. View at Publisher · View at Google Scholar
  • Nguyen Binh Anh Thu, Xuan Lan Thi Hoang, Hieu Doan, Thanh-Hao Nguyen, Dao Bui, Nguyen Phuong Thao, and Lam-Son Phan Tran, “Differential expression analysis of a subset of GmNAC genes in shoots of two contrasting drought-responsive soybean cultivars DT51 and MTD720 under normal and drought conditions,” Molecular Biology Reports, 2014. View at Publisher · View at Google Scholar
  • Atul Grover, Sadhana Singh, Pankaj Pandey, Vikas Yadav Patade, Sanjay Mohan Gupta, and M. Nasim, “Overexpression of NAC gene from Lepidium latifolium L. enhances biomass, shortens life cycle and induces cold stress tolerance in tobacco: potential for engineering fourth generation biofuel crops,” Molecular Biology Reports, 2014. View at Publisher · View at Google Scholar
  • Arun Renganathan, Jelena Kresoja-Rakic, Nohemy Echeverry, Gabriela Ziltener, Bart Vrugt, Isabelle Opitz, Rolf A. Stahel, and Emanuela Felley-Bosco, “GAS5 long non-coding RNA in malignant pleural mesothelioma,” Molecular Cancer, vol. 13, 2014. View at Publisher · View at Google Scholar
  • Lopamudra Satapathy, Dharmendra Singh, Prashant Ranjan, Dhananjay Kumar, Manish Kumar, Kumble Vinod Prabhu, and Kunal Mukhopadhyay, “Transcriptome-wide analysis of WRKY transcription factors in wheat and their leaf rust responsive expression profiling,” Molecular Genetics and Genomics, 2014. View at Publisher · View at Google Scholar
  • Daeseok Choi, Jaemyung Choi, Byeongsoo Kang, Seungchul Lee, Young-hyun Cho, and Ildoo Hwang, “iNID: An Analytical Framework for Identifying Network Models for Interplays among Developmental Signaling in Arabidopsis,” Molecular Plant, vol. 7, no. 5, pp. 792–813, 2014. View at Publisher · View at Google Scholar
  • R. Fasano, N. Gonzalez, A. Tosco, F. Dal Piaz, T. Docimo, R. Serrano, S. Grillo, A. Leone, and D. Inze, “Role of Arabidopsis UV RESISTANCE LOCUS 8 in Plant Growth Reduction under Osmotic Stress and Low Levels of UV-B,” Molecular Plant, 2014. View at Publisher · View at Google Scholar
  • Hagen Schlicke, Annabel Salinas Hartwig, Vivien Firtzlaff, Andreas S. Richter, Christine Glaesser, Klaus Maier, Iris Finkemeier, and Bernhard Grimm, “Induced Deactivation of Genes Encoding Chlorophyll Biosynthesis Enzymes Disentangles Tetrapyrrole-Mediated Retrograde Signaling,” Molecular Plant, vol. 7, no. 7, pp. 1211–1227, 2014. View at Publisher · View at Google Scholar
  • N. Sewelam, N. Jaspert, K. Van Der Kelen, V. B. Tognetti, J. Schmitz, H. Frerigmann, E. Stahl, J. Zeier, F. Van Breusegem, and V. G. Maurino, “Spatial H2O2 Signaling Specificity: H2O2 from Chloroplasts and Peroxisomes Modulates the Plant Transcriptome Differentially,” Molecular Plant, 2014. View at Publisher · View at Google Scholar
  • Alessandra Lucioli, Alessandra Berardi, Francesca Gatti, Raffaela Tavazza, Daniele Pizzichini, and Mario Tavazza, “Tomato yellow leaf curl Sardinia virus-resistant tomato plants expressing the multifunctional N-terminal domain of the replication-associated protein show transcriptional changes resembling stress-related responses,” Molecular Plant Pathology, vol. 15, no. 1, pp. 31–43, 2014. View at Publisher · View at Google Scholar
  • Javier Cabrera, Regla Bustos, Bruno Favery, Carmen Fenoll, and Carolina Escobar, “ NEMATIC: a simple and versatile tool for the in silico analysis of plant-nematode interactions ,” Molecular Plant Pathology, 2014. View at Publisher · View at Google Scholar
  • Emmanuel Koen, Pauline Trapet, Daphnée Brulé, Anna Kulik, Agnès Klinguer, Livia Atauri-Miranda, Rita Meunier-Prest, Gilles Boni, Gaétan Glauser, Brigitte Mauch-Mani, David Wendehenne, and Angélique Besson-Bard, “ β-Aminobutyric Acid (BABA)-Induced Resistance in Arabidopsis thaliana : Link with Iron Homeostasis ,” Molecular Plant-Microbe Interactions, vol. 27, no. 11, pp. 1226–1240, 2014. View at Publisher · View at Google Scholar
  • Jonathan Rodriguez-Lopez, Cynthia Martinez-Centeno, Annamalai Padmanaban, Gabriel Guillen, Juan Elias Olivares, Giovanni Stefano, Fernando Lledias, Fernando Ramos, Said A. Ghabrial, Federica Brandizzi, Mario Rocha-Sosa, Claudia Diaz-Camino, and Federico Sanchez, “Nodulin 22, a Novel Small Heat-Shock Protein of the Endoplasmic Reticulum, Is Linked to the Unfolded Protein Response in Common Bean,” Molecular Plant-Microbe Interactions, vol. 27, no. 1, pp. 18–29, 2014. View at Publisher · View at Google Scholar
  • Andrea G. Citrolo, and Giancarlo Mauri, “A local landscape mapping method for protein structure prediction in the HP model,” Natural Computing, 2014. View at Publisher · View at Google Scholar
  • Daan A. Weits, Beatrice Giuntoli, Monika Kosmacz, Sandro Parlanti, Hans-Michael Hubberten, Heike Riegler, Rainer Hoefgen, Pierdomenico Perata, Joost T. van Dongen, and Francesco Licausi, “Plant cysteine oxidases control the oxygen-dependent branch of the N-end-rule pathway,” Nature Communications, vol. 5, 2014. View at Publisher · View at Google Scholar
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  • Steven G. Hussey, Mohammed N. Saïdi, Charles A. Hefer, Alexander A. Myburg, and Jacqueline Grima-Pettenati, “ Structural, evolutionary and functional analysis of the NAC domain protein family in Eucalyptus ,” New Phytologist, 2014. View at Publisher · View at Google Scholar
  • Karin Hoedemaekers, Jan Derksen, Suzanne W. Hoogstrate, Mieke Wolters-Arts, Sung-Aeong Oh, David Twell, Celestina Mariani, and Ivo Rieu, “ BURSTING POLLEN is required to organize the pollen germination plaque and pollen tube tip in Arabidopsis thaliana ,” New Phytologist, 2014. View at Publisher · View at Google Scholar
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  • Jose M. G. Vilar, “Entropy of Leukemia on Multidimensional Morphological and Molecular Landscapes,” Physical Review X, vol. 4, no. 2, 2014. View at Publisher · View at Google Scholar
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  • Dalong Yi, Claire Lessa Alvim Kamei, Toon Cools, Sandy Vanderauwera, Naoki Takahashi, Yoko Okushima, Thomas Eekhout, Kaoru Okamoto Yoshiyama, John Larkin, Hilde Van den Daele, Phillip Conklin, Anne Britt, Masaaki Umeda, and Lieven De Veylder, “The Arabidopsis SIAMESE-RELATED Cyclin-Dependent Kinase Inhibitors SMR5 and SMR7 Regulate the DNA Damage Checkpoint in Response to Reactive Oxygen Species,” Plant Cell, vol. 26, no. 1, pp. 296–309, 2014. View at Publisher · View at Google Scholar
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