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Citations to this Journal [760 citations: 101–200 of 735 articles]

Articles published in Advances in Bioinformatics have been cited 760 times. The following is a list of the 735 articles that have cited the articles published in Advances in Bioinformatics.

  • Andrea G. Citrolo, and Giancarlo Mauri, “A local landscape mapping method for protein structure prediction in the HP model,” Natural Computing, 2014. View at Publisher · View at Google Scholar
  • Daan A. Weits, Beatrice Giuntoli, Monika Kosmacz, Sandro Parlanti, Hans-Michael Hubberten, Heike Riegler, Rainer Hoefgen, Pierdomenico Perata, Joost T. van Dongen, and Francesco Licausi, “Plant cysteine oxidases control the oxygen-dependent branch of the N-end-rule pathway,” Nature Communications, vol. 5, 2014. View at Publisher · View at Google Scholar
  • Yao-Cheng Lin, Morgane Boone, Leander Meuris, Irma Lemmens, Nadine Van Roy, Arne Soete, Joke Reumers, Matthieu Moisse, Stéphane Plaisance, Radoje Drmanac, Jason Chen, Frank Speleman, Diether Lambrechts, Yves Van de Peer, Jan Tavernier, and Nico Callewaert, “Genome dynamics of the human embryonic kidney 293 lineage in response to cell biology manipulations,” Nature Communications, vol. 5, pp. 4767, 2014. View at Publisher · View at Google Scholar
  • D. Jantas, A. Greda, S. Golda, M. Korostynski, B. Grygier, A. Roman, A. Pilc, and W. Lason, “Neuroprotective effects of metabotropic glutamate receptor group II and III activators against MPP(+)-induced cell death in human neuroblastoma SH-SY5Y cells : The impact of cell differentiation state,” Neuropharmacology, 2014. View at Publisher · View at Google Scholar
  • Daniel J. Gibbs, Ute Voß, Susan A. Harding, Jessica Fannon, Laura A. Moody, Erika Yamada, Kamal Swarup, Candida Nibau, George W. Bassel, Anushree Choudhary, Julien Lavenus, Susan J. Bradshaw, Dov J. Stekel, Malcolm J. Bennett, and Juliet C. Coates, “ At MYB93 is a novel negative regulator of lateral root development in Arabidopsis ,” New Phytologist, 2014. View at Publisher · View at Google Scholar
  • Soren Lindemose, Michael K. Jensen, Jan Van de Velde, Charlotte O'Shea, Ken S. Heyndrickx, Christopher T. Workman, Klaas Vandepoele, Karen Skriver, and Federico De Masi, “A DNA-binding-site landscape and regulatory network analysis for NAC transcription factors in Arabidopsis thaliana,” Nucleic Acids Research, vol. 42, no. 12, pp. 7681–7693, 2014. View at Publisher · View at Google Scholar
  • Mátyás Gorjánácz, “Nuclear assembly as a target for anti-cancer therapies,” Nucleus, vol. 5, no. 1, 2014. View at Publisher · View at Google Scholar
  • Lisbeth N. Fink, Sheila R. Costford, Yun S. Lee, Thomas E. Jensen, Philip J. Bilan, Andreas Oberbach, Matthias Blueher, Jerrold M. Olefsky, Anette Sams, and Amira Klip, “Pro-Inflammatory Macrophages Increase in Skeletal Muscle of High Fat-Fed Mice and Correlate with Metabolic Risk Markers in Humans,” Obesity, vol. 22, no. 3, pp. 747–757, 2014. View at Publisher · View at Google Scholar
  • Daniele Santoni, Aleksandra Swiercz, Agnieszka Zmienko, Marta Kasprzak, Marek Blazewicz, Paola Bertolazzi, and Giovanni Felici, “An Integrated Approach (CLuster Analysis Integration Method) to Combine Expression Data and Protein-Protein Interaction Networks in Agrigenomics: Application on Arabidopsis thaliana,” Omics-A Journal of Integrative Biology, vol. 18, no. 2, pp. 155–165, 2014. View at Publisher · View at Google Scholar
  • Y-X Fang, “Roles of microRNAs during prostatic tumorigenesis and tumor progression,” Oncogene, vol. 33, no. 2, pp. 135–147, 2014. View at Publisher · View at Google Scholar
  • Ouyang Yang, Jianhua Huang, and Sun Lin, “Regulatory effects of miRNA on gastric cancer cells,” Oncology Letters, vol. 8, no. 2, pp. 651–656, 2014. View at Publisher · View at Google Scholar
  • Naoki Matsushita, Shigeto Seno, Yoichi Takenaka, and Hideo Matsuda, “Metagenome fragment classification based on multiple motif-occurrence profiles,” PeerJ, vol. 2, pp. e559, 2014. View at Publisher · View at Google Scholar
  • Mikko Tikkanen, Peter J. Gollan, Nageswara Rao Mekala, Janne Isojarvi, and Eva-Mari Aro, “Light-harvesting mutants show differential gene expression upon shift to high light as a consequence of photosynthetic redox and reactive oxygen species metabolism,” Philosophical Transactions of The Royal Society B-Biological Sciences, vol. 369, no. 1640, 2014. View at Publisher · View at Google Scholar
  • Jose M. G. Vilar, “Entropy of Leukemia on Multidimensional Morphological and Molecular Landscapes,” Physical Review X, vol. 4, no. 2, 2014. View at Publisher · View at Google Scholar
  • Miriam Onrubia, Jacob Pollier, Robin Vanden Bossche, Marc Goethals, Kris Gevaert, Elisabet Moyano, Heriberto Vidal-Limon, Rosa M. Cusidó, Javier Palazón, and Alain Goossens, “Taximin, a conserved plant-specific peptide is involved in the modulation of plant-specialized metabolism,” Plant Biotechnology Journal, 2014. View at Publisher · View at Google Scholar
  • Dalong Yi, Claire Lessa Alvim Kamei, Toon Cools, Sandy Vanderauwera, Naoki Takahashi, Yoko Okushima, Thomas Eekhout, Kaoru Okamoto Yoshiyama, John Larkin, Hilde Van den Daele, Phillip Conklin, Anne Britt, Masaaki Umeda, and Lieven De Veylder, “The Arabidopsis SIAMESE-RELATED Cyclin-Dependent Kinase Inhibitors SMR5 and SMR7 Regulate the DNA Damage Checkpoint in Response to Reactive Oxygen Species,” Plant Cell, vol. 26, no. 1, pp. 296–309, 2014. View at Publisher · View at Google Scholar
  • Sebastian Wolf, and Herman Hoefte, “Growth Control: A Saga of Cell Walls, ROS, and Peptide Receptors,” Plant Cell, vol. 26, no. 5, pp. 1848–1856, 2014. View at Publisher · View at Google Scholar
  • Florence Paynel, Christelle Leroux, Ogier Surcouf, Annick Schaumann, Jérôme Pelloux, Azeddine Driouich, Jean Claude Mollet, Patrice Lerouge, Arnaud Lehner, and Alain Mareck, “Kiwi fruit PMEI inhibits PME activity, modulates root elongation and induces pollen tube burst in Arabidopsis thaliana,” Plant Growth Regulation, 2014. View at Publisher · View at Google Scholar
  • Vladimir Zhurov, Marie Navarro, Kristie A. Bruinsma, Vicent Arbona, M. Estrella Santamaria, Marc Cazaux, Nicky Wybouw, Edward J. Osborne, Cherise Ens, Cristina Rioja, Vanessa Vermeirssen, Ignacio Rubio-Somoza, Priti Krishna, Isabel Diaz, Markus Schmid, Aurelio Gomez-Cadenas, Yves Van de Peer, Miodrag Grbic, Richard M. Clark, Thomas Van Leeuwen, and Vojislava Grbic, “Reciprocal Responses in the Interaction between Arabidopsis and the Cell-Content-Feeding Chelicerate Herbivore Spider Mite,” Plant Physiology, vol. 164, no. 1, pp. 384–399, 2014. View at Publisher · View at Google Scholar
  • Kyonoshin Maruyama, Kaoru Urano, Kyouko Yoshiwara, Yoshihiko Morishita, Nozomu Sakurai, Hideyuki Suzuki, Mikiko Kojima, Hitoshi Sakakibara, Daisuke Shibata, Kazuki Saito, Kazuo Shinozaki, and Kazuko Yamaguchi-Shinozaki, “Integrated Analysis of the Effects of Cold and Dehydration on Rice Metabolites, Phytohormones, and Gene Transcripts,” Plant Physiology, vol. 164, no. 4, pp. 1759–1771, 2014. View at Publisher · View at Google Scholar
  • Amna Mhamdi, and Christine H. Foyer, “The Roles of Reactive Oxygen Metabolism in Drought: Not So Cut and Dried,” Plant Physiology, vol. 164, no. 4, pp. 1636–1648, 2014. View at Publisher · View at Google Scholar
  • Seraina Beeler, Hung-Chi Liu, Martha Stadler, Tina Schreier, Simona Eicke, Wei-Ling Lue, Elisabeth Truernit, Samuel C. Zeeman, Jychian Chen, and Oliver Koetting, “Plastidial NAD-Dependent Malate Dehydrogenase Is Critical for Embryo Development and Heterotrophic Metabolism in Arabidopsis,” Plant Physiology, vol. 164, no. 3, pp. 1175–1190, 2014. View at Publisher · View at Google Scholar
  • David E. Cook, Adam M. Bayless, Kai Wang, Xiaoli Guo, Qijian Song, Jiming Jiang, and Andrew F. Bent, “Distinct Copy Number, Coding Sequence, and Locus Methylation Patterns Underlie Rhg1-Mediated Soybean Resistance to Soybean Cyst Nematode,” Plant Physiology, vol. 165, no. 2, pp. 630–647, 2014. View at Publisher · View at Google Scholar
  • Avishai Mor, Eugene Koh, Lev Weiner, Shilo Rosenwasser, and Hadas Sibony-Benyamini, “Singlet Oxygen Signatures Are Detected Independent of Light or Chloroplasts in Response to Multiple Stresses,” Plant Physiology, vol. 165, no. 1, pp. 249–261, 2014. View at Publisher · View at Google Scholar
  • Maria Klecker, Philipp Gasch, Helga Peisker, Peter Doermann, Hagen Schlicke, Bernhard Grimm, and Angelika Mustroph, “A Shoot-Specific Hypoxic Response of Arabidopsis Sheds Light on the Role of the Phosphate-Responsive Transcription Factor PHOSPHATE STARVATION RESPONSE1,” Plant Physiology, vol. 165, no. 2, pp. 774–790, 2014. View at Publisher · View at Google Scholar
  • Lena Kruessel, Johannes Junemann, Markus Wirtz, Hannah Birke, Jeremy D. Thornton, Luke W. Browning, Gernot Poschet, Ruediger Hell, Janneke Balk, and Hans-Peter Braun, “The Mitochondrial Sulfur Dioxygenase ETHYLMALONIC ENCEPHALOPATHY PROTEIN1 Is Required for Amino Acid Catabolism during Carbohydrate Starvation and Embryo Development in Arabidopsis,” Plant Physiology, vol. 165, no. 1, pp. 92–104, 2014. View at Publisher · View at Google Scholar
  • Jianfeng Zhang, Anne C. Rea, Tingdong Fu, Chaozhi Ma, and June B. Nasrallah, “Exploring the role of a stigma-expressed plant U-box gene in the pollination responses of transgenic self-incompatible Arabidopsis thaliana,” Plant Reproduction, 2014. View at Publisher · View at Google Scholar
  • Raghavendra P. Savada, and Peta C. Bonham-Smith, “Differential transcript accumulation and subcellular localization of Arabidopsis ribosomal proteins,” Plant Science, 2014. View at Publisher · View at Google Scholar
  • Eduardo González-Grandío, and Pilar Cubas, “Identification of gene functions associated to active and dormant buds in Arabidopsis,” Plant Signaling & Behavior, vol. 9, no. 1, pp. e27994, 2014. View at Publisher · View at Google Scholar
  • C. Belin, T. Bashandy, J. Cela, V. Delorme-Hinoux, C. Riondet, and J. P. Reichheld, “ A comprehensive study of thiol reduction gene expression under stress conditions in A rabidopsis thaliana ,” Plant, Cell & Environment, 2014. View at Publisher · View at Google Scholar
  • Antonio F. Tiburcio, Teresa Altabella, Marta Bitrián, and Rubén Alcázar, “The roles of polyamines during the lifespan of plants: from development to stress,” Planta, 2014. View at Publisher · View at Google Scholar
  • Ayan Sadhukhan, Yasufumi Kobayashi, Yuriko Kobayashi, Mutsutomo Tokizawa, Yoshiharu Y. Yamamoto, Satoshi Iuchi, Hiroyuki Koyama, Sanjib Kumar Panda, and Lingaraj Sahoo, “VuDREB2A, a novel DREB2-type transcription factor in the drought-tolerant legume cowpea, mediates DRE-dependent expression of stress-responsive genes and confers enhanced drought resistance in transgenic Arabidopsis,” Planta, 2014. View at Publisher · View at Google Scholar
  • Nan Zhao, Jing Ginger Han, Chi-Ren Shyu, and Dmitry Korkin, “Determining Effects of Non-synonymous SNPs on Protein-Protein Interactions using Supervised and Semi-supervised Learning,” Plos Computational Biology, vol. 10, no. 5, 2014. View at Publisher · View at Google Scholar
  • Benedict Anchang, Mary T. Do, Xi Zhao, and Sylvia K. Plevritis, “CCAST: A Model-Based Gating Strategy to Isolate Homogeneous Subpopulations in a Heterogeneous Population of Single Cells,” Plos Computational Biology, vol. 10, no. 7, 2014. View at Publisher · View at Google Scholar
  • Kristin Blacklock, and Gennady M. Verkhivker, “Computational Modeling of Allosteric Regulation in the Hsp90 Chaperones: A Statistical Ensemble Analysis of Protein Structure Networks and Allosteric Communications,” Plos Computational Biology, vol. 10, no. 6, 2014. View at Publisher · View at Google Scholar
  • Raphy Zarecki, Matthew A. Oberhardt, Leah Reshef, Uri Gophna, and Eytan Ruppin, “A Novel Nutritional Predictor Links Microbial Fastidiousness with Lowered Ubiquity, Growth Rate, and Cooperativeness,” Plos Computational Biology, vol. 10, no. 7, 2014. View at Publisher · View at Google Scholar
  • Tanmoy Bhattacharyya, Radka Reifova, Sona Gregorova, Petr Simecek, Vaclav Gergelits, Martin Mistrik, Iva Martincova, Jaroslav Pialek, and Jiri Forejt, “X Chromosome Control of Meiotic Chromosome Synapsis in Mouse Inter-Subspecific Hybrids,” Plos Genetics, vol. 10, no. 2, 2014. View at Publisher · View at Google Scholar
  • Mikael Brosche, Tiina Blomster, Jarkko Salojarvi, Fuqiang Cui, Nina Sipari, Johanna Leppala, Airi Lamminmaki, Gloria Tomai, Shaman Narayanasamy, Ramesha A. Reddy, Markku Keinanen, Kirk Overmyer, and Jaakko Kangasjarvi, “Transcriptomics and Functional Genomics of ROS-Induced Cell Death Regulation by RADICAL-INDUCED CELL DEATH1,” Plos Genetics, vol. 10, no. 2, 2014. View at Publisher · View at Google Scholar
  • Amparo Cuellar Perez, Astrid Nagels Durand, Robin Vanden Bossche, Rebecca De Clercq, Geert Persiau, Saskia C. M. Van Wees, Corne M. J. Pieterse, Kris Gevaert, Geert De Jaeger, Alain Goossens, and Laurens Pauwels, “The Non-JAZ TIFY Protein TIFY8 from Arabidopsis thaliana Is a Transcriptional Repressor,” Plos One, vol. 9, no. 1, 2014. View at Publisher · View at Google Scholar
  • Charles Bettembourg, Christian Diot, and Olivier Dameron, “Semantic Particularity Measure for Functional Characterization of Gene Sets Using Gene Ontology,” Plos One, vol. 9, no. 1, 2014. View at Publisher · View at Google Scholar
  • Jonas Roos, Sarosh Bejai, Shinichi Oide, and Christina Dixelius, “RabGAP22 Is Required for Defense to the Vascular Pathogen Verticillium longisporum and Contributes to Stomata Immunity,” Plos One, vol. 9, no. 2, 2014. View at Publisher · View at Google Scholar
  • Anne E. Thessen, and Cynthia Sims Parr, “Knowledge Extraction and Semantic Annotation of Text from the Encyclopedia of Life,” Plos One, vol. 9, no. 3, 2014. View at Publisher · View at Google Scholar
  • Michele Filosi, Roberto Visintainer, Samantha Riccadonna, and Cesare Furlanello, “Stability Indicators in Network Reconstruction,” Plos One, vol. 9, no. 2, 2014. View at Publisher · View at Google Scholar
  • John P. Fahrenbach, Jorge Andrade, and Elizabeth M. McNally, “The CO-Regulation Database (CORD): A Tool to Identify Coordinately Expressed Genes,” Plos One, vol. 9, no. 3, 2014. View at Publisher · View at Google Scholar
  • Azeem Mehmood Butt, Izza Nasrullah, and Yigang Tong, “Genome-Wide Analysis of Codon Usage and Influencing Factors in Chikungunya Viruses,” Plos One, vol. 9, no. 3, 2014. View at Publisher · View at Google Scholar
  • Simon Foucart, and Gail Rosen, “WGSQuikr: Fast Whole-Genome Shotgun Metagenomic Classification,” Plos One, vol. 9, no. 3, 2014. View at Publisher · View at Google Scholar
  • Tulin Ersahin, Levent Carkacioglu, Tolga Can, Ozlen Konu, and Volkan Atalay, “Identification of Novel Reference Genes Based on MeSH Categories,” Plos One, vol. 9, no. 3, 2014. View at Publisher · View at Google Scholar
  • Adeel Malik, Juyong Lee, and Jooyoung Lee, “Community-Based Network Study of Protein-Carbohydrate Interactions in Plant Lectins Using Glycan Array Data,” Plos One, vol. 9, no. 4, 2014. View at Publisher · View at Google Scholar
  • Jared C. Weddell, and P. I. Imoukhuede, “Quantitative Characterization of Cellular Membrane-Receptor Heterogeneity through Statistical and Computational Modeling,” Plos One, vol. 9, no. 5, 2014. View at Publisher · View at Google Scholar
  • Sabine Kunz, Edouard Pesquet, and Leszek A. Kleczkowski, “Functional Dissection of Sugar Signals Affecting Gene Expression in Arabidopsis thaliana,” Plos One, vol. 9, no. 6, 2014. View at Publisher · View at Google Scholar
  • Wen-Yan Li, Xiang Wang, Ri Li, Wen-Qiang Li, and Kun-Ming Chen, “Genome-Wide Analysis of the NADK Gene Family in Plants,” Plos One, vol. 9, no. 6, 2014. View at Publisher · View at Google Scholar
  • Yoon-Dong Park, Soowan Shin, John Panepinto, Jeanie Ramos, Jin Qiu, Susana Frases, Patricia Albuquerque, Radames J. B. Cordero, Nannan Zhang, Uwe Himmelreich, David Beenhouwer, John E. Bennett, Arturo Casadevall, and Peter R. Williamson, “A Role for LHC1 in Higher Order Structure and Complement Binding of the Cryptococcus neoformans Capsule,” Plos Pathogens, vol. 10, no. 5, 2014. View at Publisher · View at Google Scholar
  • Jose M. Franco-Zorrilla, Irene Lopez-Vidriero, Jose L. Carrasco, Marta Godoy, Pablo Vera, and Roberto Solano, “DNA-binding specificities of plant transcription factors and their potential to define target genes,” Proceedings of The National Academy of Sciences of The United States of Ame, vol. 111, no. 6, pp. 2367–2372, 2014. View at Publisher · View at Google Scholar
  • Robert V. Bruggner, Bernd Bodenmiller, David L. Dill, Robert J. Tibshirani, and Garry P. Nolan, “Automated identification of stratifying signatures in cellular subpopulations,” Proceedings of The National Academy of Sciences of The United States of Ame, vol. 111, no. 26, pp. E2770–E2777, 2014. View at Publisher · View at Google Scholar
  • Michelle R. Newman, Pamela J. Sykes, Benjamin J. Blyth, Eva Bezak, Mark D. Lawrence, Katherine L. Morel, and Rebecca J. Ormsby, “The Methylation of DNA Repeat Elements is Sex-Dependent and Temporally Different in Response to X Radiation in Radiosensitive and Radioresistant Mouse Strains,” Radiation Research, vol. 181, no. 1, pp. 65–75, 2014. View at Publisher · View at Google Scholar
  • R. Njemini, O. O. Onyema, W. Renmans, I. Bautmans, M. De Waele, and T. Mets, “Shortcomings in the Application of Multicolour Flow Cytometry in Lymphocyte Subsets Enumeration,” Scandinavian Journal of Immunology, vol. 79, no. 2, pp. 75–89, 2014. View at Publisher · View at Google Scholar
  • Sigal Cohen, Michal Zmudjak, Catherine Colas des Francs-Small, Sunita Malik, Felix Shaya, Ido Keren, Eduard Belausov, Yair Many, Gregory G. Brown, Ian Small, and Oren Ostersetzer-Biran, “ nMAT4, a maturase factor required for nad1 pre-mRNA processing and maturation, is essential for holocomplex I biogenesis in Arabidopsis mitochondria ,” The Plant Journal, 2014. View at Publisher · View at Google Scholar
  • Oskar N. Johansson, Elena Fantozzi, Per Fahlberg, Anders K. Nilsson, Nathalie Buhot, Mahmut Tör, and Mats X. Andersson, “ Role of the penetration-resistance genes PEN1, PEN2 and PEN3 in the hypersensitive response and race-specific resistance in Arabidopsis thaliana ,” The Plant Journal, 2014. View at Publisher · View at Google Scholar
  • Manuel Hiss, Oliver Laule, Rasa M. Meskauskiene, Muhammad A. Arif, Eva L. Decker, Anika Erxleben, Wolfgang Frank, Sebastian T. Hanke, Daniel Lang, Anja Martin, Christina Neu, Ralf Reski, Sandra Richardt, Mareike Schallenberg-Rüdinger, Peter Szövényi, Theodhor Tiko, Gertrud Wiedemann, Luise Wolf, Philip Zimmermann, and Stefan A. Rensing, “ Large-scale gene expression profiling data for the model moss Physcomitrella patens aid understanding of developmental progression, culture and stress conditions ,” The Plant Journal, 2014. View at Publisher · View at Google Scholar
  • Chunni Wang, Lin Wang, Bo Su, Ning Lu, Jingjing Song, Xiaoqing Yang, Weiwei Fu, Weiwei Tan, and Bo Han, “Serine protease inhibitor Kazal type 1 promotes epithelial-mesenchymal transition through EGFR signaling pathway in prostate cancer,” The Prostate, vol. 74, no. 7, pp. 689–701, 2014. View at Publisher · View at Google Scholar
  • John M. Taylor, “Host RNA circles and the origin of hepatitis delta virus,” World Journal of Gastroenterology, vol. 20, no. 11, pp. 2971–2978, 2014. View at Publisher · View at Google Scholar
  • Amina Noor, Erchin Serpedin, Mohamed Nounou, and Hazem Nounou, “Reverse Engineering Sparse Gene Regulatory Networks Using Cubature Kalman Filter and Compressed Sensing,” Advances in Bioinformatics, vol. 2013, pp. 1–11, 2013. View at Publisher · View at Google Scholar
  • Tomas Hruz, Markus Wyss, Christoph Lucas, Oliver Laule, Peter von Rohr, Philip Zimmermann, and Stefan Bleuler, “A Multilevel Gamma-Clustering Layout Algorithm for Visualization of Biological Networks,” Advances in Bioinformatics, vol. 2013, pp. 1–10, 2013. View at Publisher · View at Google Scholar
  • Malte Brinkmeyer, Thasso Griebel, and Sebastian Boecker, “FlipCut Supertrees: Towards Matrix Representation Accuracy in Polynomial Time,” Algorithmica, vol. 67, no. 2, pp. 142–160, 2013. View at Publisher · View at Google Scholar
  • Ruth E. Wachtel, and Franklin Dexter, “Difficulties and Challenges Associated with Literature Searches in Operating Room Management, Complete with Recommendations,” Anesthesia and Analgesia, vol. 117, no. 6, pp. 1460–1479, 2013. View at Publisher · View at Google Scholar
  • Francesco Pinosa, Maura Begheldo, Taras Pasternak, Monica Zermiani, Ivan A. Paponov, Alexander Dovzhenko, Gianni Barcaccia, Benedetto Ruperti, and Klaus Palme, “The Arabidopsis thaliana Mob1A gene is required for organ growth and correct tissue patterning of the root tip,” Annals of Botany, vol. 112, no. 9, pp. 1803–1814, 2013. View at Publisher · View at Google Scholar
  • Markus Schwarzlaender, and Iris Finkemeier, “Mitochondrial Energy and Redox Signaling in Plants,” Antioxidants & Redox Signaling, vol. 18, no. 16, pp. 2122–2144, 2013. View at Publisher · View at Google Scholar
  • Shaomin Yan, and Guang Wu, “Predictions of Enzymatic Parameters: A Mini-Review with Focus on Enzymes for Biofuel,” Applied Biochemistry and Biotechnology, vol. 171, no. 3, pp. 590–615, 2013. View at Publisher · View at Google Scholar
  • Mark J. Soloski, and Francis J. Chrest, “Multiparameter Flow Cytometry for Discovery of Disease Mechanisms in Rheumatic Diseases,” Arthritis And Rheumatism, vol. 65, no. 5, pp. 1148–1156, 2013. View at Publisher · View at Google Scholar
  • Nicolas Delaleu, Cq Cuong Q Nguyen, Kidane M. Tekle, Roland Jonsson, and Ammon B. Peck, “Transcriptional landscapes of emerging autoimmunity: transient aberrations in the targeted tissue's extracellular milieu precede immune responses in Sjogren's syndrome,” Arthritis Research & Therapy, vol. 15, no. 5, 2013. View at Publisher · View at Google Scholar
  • D.C. Anderson, and Krishna Kodukula, “Biomarkers in pharmacology and drug discovery,” Biochemical Pharmacology, 2013. View at Publisher · View at Google Scholar
  • Igor Pokotylo, Yaroslav Kolesnikov, Volodymyr Kravets, Alain Zachowski, and Eric Ruelland, “Plant phosphoinositide-dependent phospholipases C: variations around a canonical theme,” Biochimie, 2013. View at Publisher · View at Google Scholar
  • Dokyoon Kim, Ruowang Li, Scott M. Dudek, and Marylyn D. Ritchie, “ATHENA: Identifying interactions between different levels of genomic data associated with cancer clinical outcomes using grammatical evolution neural network,” Biodata Mining, vol. 6, 2013. View at Publisher · View at Google Scholar
  • Joseph Lachance, and Sarah A. Tishkoff, “SNP ascertainment bias in population genetic analyses: Why it is important, and how to correct it,” Bioessays, vol. 35, no. 9, pp. 780–786, 2013. View at Publisher · View at Google Scholar
  • Dhwani K. Desai, Harald Schunck, Johannes W. Loeser, and Julie LaRoche, “Fragment recruitment on metabolic pathways: comparative metabolic profiling of metagenomes and metatranscriptomes,” Bioinformatics, vol. 29, no. 6, pp. 790–791, 2013. View at Publisher · View at Google Scholar
  • D. Koslicki, S. Foucart, and G. Rosen, “Quikr: a method for rapid reconstruction of bacterial communities via compressive sensing,” Bioinformatics, 2013. View at Publisher · View at Google Scholar
  • Himadri Singh, Mohammed Farouk, Barish Baran Bose, and Prabhakar Singh, “Novel genes underlying beta cell survival in metabolic stress.,” Bioinformation, vol. 9, no. 1, pp. 37–41, 2013. View at Publisher · View at Google Scholar
  • Gaston K. Mazandu, and Nicola J. Mulder, “Information Content-Based Gene Ontology Semantic Similarity Approaches: Toward a Unified Framework Theory,” BioMed Research International, vol. 2013, pp. 1–11, 2013. View at Publisher · View at Google Scholar
  • T. Holden, E. Cheung, S. Dehipawala, J. Ye, G. Tremberger, D. Lieberman, and T. Cheung, “Gene Entropy-Fractal Dimension Informatics with Application to Mouse-Human Translational Medicine,” BioMed Research International, vol. 2013, pp. 1–7, 2013. View at Publisher · View at Google Scholar
  • David Zalabak, Hana Pospisilova, Maria Smehilova, Katarina Mrizova, Ivo Frebort, and Petr Galuszka, “Genetic engineering of cytokinin metabolism: Prospective way to improve agricultural traits of crop plants,” Biotechnology Advances, vol. 31, no. 1, pp. 97–117, 2013. View at Publisher · View at Google Scholar
  • Katarína Mrízová, Edita Holasková, M. Tufan Öz, Eva Jiskrová, Ivo Frébort, and Petr Galuszka, “Transgenic barley: A prospective tool for biotechnology and agriculture,” Biotechnology Advances, 2013. View at Publisher · View at Google Scholar
  • Aaron Weimann, Yulia Trukhina, Phillip B Pope, Sebastian GA Konietzny, and Alice C McHardy, “De novo prediction of the genomic components and capabilities for microbial plant biomass degradation from (meta-)genomes,” Biotechnology for Biofuels, vol. 6, no. 1, pp. 24, 2013. View at Publisher · View at Google Scholar
  • Suk-Bok Pae, In-Youl Baek, and Ramalingam Radhakrishnan, “Penicillium sp mitigates Fusarium-induced biotic stress in sesame plants,” Biotechnology Letters, vol. 35, no. 7, pp. 1073–1078, 2013. View at Publisher · View at Google Scholar
  • Gaston K. Mazandu, and Nicola J. Mulder, “DaGO-Fun: tool for Gene Ontology-based functional analysis using term information content measures,” Bmc Bioinformatics, vol. 14, 2013. View at Publisher · View at Google Scholar
  • Valeria S. Lopes-Caitar, Mayra C. C. G. de Carvalho, Luana M. Darben, Marcia K. Kuwahara, Alexandre L. Nepomuceno, Waldir P. Dias, Ricardo V. Abdelnoor, and Francismar C. Marcelino-Guimaraes, “Genome-wide analysis of the Hsp20 gene family in soybean: comprehensive sequence, genomic organization and expression profile analysis under abiotic and biotic stresses,” Bmc Genomics, vol. 14, 2013. View at Publisher · View at Google Scholar
  • Ajay Prasad, Suchitra Suresh Kumar, Christophe Dessimoz, Stefan Bleuler, Oliver Laule, Tomas Hruz, Wilhelm Gruissem, and Philip Zimmermann, “Global regulatory architecture of human, mouse and rat tissue transcriptomes,” Bmc Genomics, vol. 14, 2013. View at Publisher · View at Google Scholar
  • Matthew R. Tucker, Farshad Roodbarkelari, Elisabeth Truernit, Nikolai M. Adamski, Annika Hinze, Barbara Lohmueller, Tobias Wuerschum, and Thomas Laux, “Accession-specific modifiers act with ZWILLE/ARGONAUTE10 to maintain shoot meristem stem cells during embryogenesis in Arabidopsis,” Bmc Genomics, vol. 14, 2013. View at Publisher · View at Google Scholar
  • Ming-Chih Shih, Rachel Donohue, Chung-Che Chang, and Youli Zu, “Automatic B cell lymphoma detection using flow cytometry data,” Bmc Genomics, vol. 14, 2013. View at Publisher · View at Google Scholar
  • Satish M. Srinivasan, and Chittibabu Guda, “MetaID: A novel method for identification and quantification of metagenomic samples,” Bmc Genomics, vol. 14, 2013. View at Publisher · View at Google Scholar
  • Christopher Page, “Developing an online programme in computational biology,” Briefings in Bioinformatics, vol. 14, no. 6, pp. 775–783, 2013. View at Publisher · View at Google Scholar
  • Thomas Blicher, Erik Bongcam-Rudloff, Michelle D. Brazas, Cath Brooksbank, Aidan Budd, Javier De Las Rivas, Jacqueline Dreyer, Pedro L. Fernandes, Celia van Gelder, Joachim Jacob, Rafael C. Jimenez, Jane Loveland, Federico Moran, Nicola Mulder, Tommi Nyroenen, Kristian Rother, Maria Victoria Schneider, and Teresa K. Attwood, “Best practices in bioinformatics training for life scientists,” Briefings in Bioinformatics, vol. 14, no. 5, pp. 528–537, 2013. View at Publisher · View at Google Scholar
  • Carlo Cattani, and Gaetano Pierro, “On the Fractal Geometry of DNA by the Binary Image Analysis,” Bulletin of Mathematical Biology, 2013. View at Publisher · View at Google Scholar
  • Mary Kathryn Doud, Noa Noy, Liraz Levi, Darcie Seachrist, Glenn Lobo, Johannes von Lintig, and Gregory P. Tochtrop, “Genetic Ablation of the Fatty Acid-Binding Protein FABP5 Suppresses HER2-Induced Mammary Tumorigenesis,” Cancer Research, vol. 73, no. 15, pp. 4770–4780, 2013. View at Publisher · View at Google Scholar
  • Andreas Blennow, Susanne L. Jensen, Shahnoor S. Shaik, Katsiaryna Skryhan, Massimiliano Carciofi, Preben B. Holm, Kim H. Hebelstrup, and Vanja Tanackovic, “Future Cereal Starch Bioengineering: Cereal Ancestors Encounter Gene Technology and Designer Enzymes,” Cereal Chemistry, vol. 90, no. 4, pp. 274–287, 2013. View at Publisher · View at Google Scholar
  • Nobel C. Zong, Haomin Li, Hua Li, Maggie P. Y. Lam, Rafael C. Jimenez, Christina S. Kim, Ning Deng, Allen K. Kim, Jeong Ho Choi, Ivette Zelaya, David Liem, David Meyer, Jacob Odeberg, Caiyun Fang, Hao-jie Lu, Tao Xu, James Weiss, Huilong Duan, Mathias Uhlen, John R. Yates, Rolf Apweiler, Junbo Ge, Henning Hermjakob, and Peipei Ping, “Integration of Cardiac Proteome Biology and Medicine by a Specialized Knowledgebase,” Circulation Research, vol. 113, no. 9, pp. 1043–1053, 2013. View at Publisher · View at Google Scholar
  • Alexandru Florin Badea, Monica Lupsor Platon, Maria Crisan, Carlo Cattani, Iulia Badea, Gaetano Pierro, Gianpaolo Sannino, and Grigore Baciut, “Fractal Analysis of Elastographic Images for Automatic Detection of Diffuse Diseases of Salivary Glands: Preliminary Results,” Computational and Mathematical Methods in Medicine, vol. 2013, pp. 1–6, 2013. View at Publisher · View at Google Scholar
  • Anna Telaar, Dirk Repsilber, and Gerd Nuernberg, “Biomarker discovery: classification using pooled samples,” Computational Statistics, vol. 28, no. 1, pp. 67–106, 2013. View at Publisher · View at Google Scholar
  • Fatemeh Safara, Shyamala Doraisamy, Azreen Azman, Azrul Jantan, and Sri Ranga, “Multi-Level Basis Selection of Wavelet Packet Decomposition Tree for Heart Sound Classification,” Computers in Biology and Medicine, 2013. View at Publisher · View at Google Scholar
  • Sudisha Jogaiah, Sharathchandra Ramsandra Govind, and Lsp Lam-Son Phan Tran, “Systems biology-based approaches toward understanding drought tolerance in food crops,” Critical Reviews In Biotechnology, vol. 33, no. 1, pp. 23–39, 2013. View at Publisher · View at Google Scholar
  • Nolwenn Le Meur, “Computational methods for evaluation of cell-based data assessment—Bioconductor,” Current Opinion in Biotechnology, vol. 24, no. 1, pp. 105–111, 2013. View at Publisher · View at Google Scholar