Research Article
Sequence, Structure, and Binding Analysis of Cyclodextrinase (TK1770) from T. kodakarensis (KOD1) Using an In Silico Approach
Table 2
List of the PDB files used as templates for homology modeling of CDase_Tk1770.
| Serial number | PDB ID | Organism | Enzyme | % identity with TK1770 | % query cover |
| 1 | 4AEF | P. furiosus | Amylase | 56 | 98 | 2 | 1EA9 | Bacillus sp. | Cyclomaltodextrinase | 33 | 76 | 3 | 1J0J | G. stearothermophilus | Neopullulanase | 33 | 78 | 4 | 1SMA | Thermus sp. | Maltogenic amylase | 32 | 79 | 5 | 4AEE | S. marinus | Maltogenic amylase | 29 | 95 | 6 | 1WZL | Thermoactinomyces vulgaris | α-amylase II | 35 | 76 |
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