Accession # AAs MW [kDa] Calc. pI Description Coverage # peptidesScore A0 Coverage A0 # peptides A0 gi38491705 192 22.7 10.1 Vif protein [human immunodeficiency virus 1] 13.54 12 9.22 13.54 4 gi73913089 104 11.7 10.1 Gag protein [human immunodeficiency virus 1] 14.42 15 6.27 14.42 4 gi58374258 869 98.1 8.8 Envelope glycoprotein [human immunodeficiency virus 1] 1.5 5 5.63 1.5 3 gi183197180 404 45.8 8.4 Pol protein [human immunodeficiency virus 1] 3.47 3 5.27 3.47 3 gi255984636 160 18.1 5.3 Reverse transcriptase [human immunodeficiency virus 1] 7.5 4 4.80 7.5 2 gi256012108 114 13.5 5.7 Nef protein [human immunodeficiency virus 1] 14.04 3 4.53 14.04 2 gi9756252 524 60.4 8.7 Pol precursor [human immunodeficiency virus 1] 4.01 2 4.46 4.01 2 gi67082579 191 22.3 9.4 Reverse transcriptase [human immunodeficiency virus 1] 10.47 2 4.43 10.47 2 gi2290009 852 96.7 8.5 Envelope glycoprotein [human immunodeficiency virus 1] 7.16 11 4.33 5.87 3 gi167886806 25 2.7 8.7 Rev protein [human immunodeficiency virus 1] 56 4 4.29 56 2 gi23344577 99 10.6 9.4 Protease [human immunodeficiency virus 1] 12.12 5 4.36 12.12 2 gi4324808 1437 161.9 8.3 Gag-pol polyprotein [human immunodeficiency virus 1] 2.51 7 4.05 1.6 2 gi222533599 73 8.0 9.1 Env C2V3 protein [human immunodeficiency virus 1] 23.29 4 3.85 23.29 2 gi71060450 206 23.7 6.3 Negative factor [human immunodeficiency virus 1] 4.85 4 3.84 4.85 2 gi37935985 85 10.3 4.8 Vpu protein [human immunodeficiency virus 1] 11.76 4 3.84 11.76 2 gi108860432 870 98.8 8.5 gp160 [human immunodeficiency virus 1] 3.33 2 3.74 3.33 2 gi114801226 209 24.4 10.1 Tat protein [human immunodeficiency virus 1] 5.26 2 3.70 5.26 2 gi22596451 341 38.6 8.0 Truncated envelope glycoprotein [human immunodeficiency virus 1] 3.81 4 3.68 3.81 2 gi183200570 342 38.7 9.2 Truncated pol protein [human immunodeficiency virus 1] 3.51 2 3.68 3.51 2 gi34786230 176 19.8 9.6 gp120 protein [human immunodeficiency virus 1] 10.8 3 3.60 10.8 3 gi1002239 104 11.5 8.9 Envelope glycoprotein, v3 region [human immunodeficiency virus 1] 18.27 2 3.54 18.27 2 gi77168129 95 11.3 7.6 Vpr protein [human immunodeficiency virus 1] 13.68 3 3.40 13.68 2 gi222532593 129 14.7 8.4 Gag p17 protein [human immunodeficiency virus 1] 8.53 3 2.61 8.53 1 gi219688191 132 14.9 10.2 Matrix protein [human immunodeficiency virus 1] 9.09 6 2.56 9.09 1 gi255687141 288 32.1 7.7 Integrase [human immunodeficiency virus 1] 9.03 1 2.52 9.03 1 gi222532161 132 15.0 9.5 Gag p17 protein [human immunodeficiency virus 1] 9.09 6 2.45 9.09 1 gi37934078 573 65.0 9.0 Gag-pol fusion polyprotein [human immunodeficiency virus 1] 2.79 2 2.42 2.79 2 gi405003 207 23.1 7.7 gp120 [human immunodeficiency virus 1] 12.08 1 2.41 12.08 1 gi54792352 213 23.7 5.6 Gag polyprotein [human immunodeficiency virus 1] 9.39 2 2.34 9.39 2 gi3885826 132 14.9 9.6 p17 matrix [human immunodeficiency virus 1] 11.36 2 2.31 11.36 1