Research Article

An Algorithm for Finding Functional Modules and Protein Complexes in Protein-Protein Interaction Networks

Table 4

Comparison of our method and CFinder in terms of the number of functional categories shared by all the proteins in the groups.

Functional categories common to all proteins in the groupGroups found by our programGroups found by CFinder

19 (7.8 )35 (18.0 )
119 (16.3 )37 (18.9 )
227 (23.3 )35 (18.0 )
261 (52.6 )88 (45.1 )

Total116 (100 )195 (100 )