Interaction Map and Selection of microRNA Targets in Parkinson's Disease-Related Genes

Table 2

Common microRNA target sites for various genes predicted using miRanda and TargetScan.

Gene	microRNA	Start position of target sites predicted by miRanda	End position of target sites predicted by miRanda	Start position of target sites predicted by TargetScan	End position of target sites predicted by TargetScan
CASP9	hsa-miR-224	240	264	255	261
COX6B2	hsa-miR-138	676	701	693	699
	hsa-miR-217	6	36	26	32
	hsa-miR-339-5p	454	479	471	477
	hsa-miR-492	274	293	285	291
	hsa-miR-608	55	86	77	83
	hsa-miR-661	163	187	180	186
	hsa-miR-940	672	688	681	687
CYCS	hsa-miR-1301	1812	1840	1830	1836
	hsa-miR-25	2191	2214	2204	2210
	hsa-miR-510	2244	2273	2262	2268
	hsa-miR-591	1332	1352	1341	1347
	hsa-miR-658	2198	2232	2221	2227
	hsa-miR-663	2283	2304	2286	2292
	hsa-miR-769-5p	1943	1974	1964	1970
	hsa-miR-939	1990	2018	2007	2013
APAF1	hsa-miR-650	639	662	654	660
PARK2	hsa-miR-361-3p	21	40	31	37
	hsa-miR-574-5p	96	118	110	116
	hsa-miR-614	263	291	282	288
SEPT 5	hsa-miR-1207-5p	643	664	657	663
	hsa-miR-1250	671	696	687	693
	hsa-miR-1825	600	622	614	620
	hsa-miR-484	871	894	887	893
	hsa-miR-572	877	899	880	886
	hsa-miR-637	81	104	95	101
	hsa-miR-663	160	183	176	182
	hsa-miR-663b	74	93	86	92
SLC6A3	hsa-miR-1301	1613	1635	1626	1632
	hsa-miR-193b	1518	1541	1533	1539
	hsa-miR-331-3p	331	351	342	348
	hsa-miR-34a	684	706	698	704
	hsa-miR-449a	686	706	698	704
	hsa-miR-486-3p	324	347	337	343
	hsa-miR-601	406	432	423	429
	hsa-miR-637	883	912	883	889
TH	hsa-miR-34c-5p	211	240	230	236
	hsa-miR-658	217	245	236	242
	hsa-miR-885-3p	96	115	108	114
	hsa-miR-920	107	125	116	122
GBA	hsa-miR-1233	12	33	25	31
	hsa-miR-212	363	386	376	382
	hsa-miR-331-3p	109	133	124	130
	hsa-miR-331-3p	159	178	169	175
	hsa-miR-519e	4	26	18	24
	hsa-miR-637	197	223	215	221
	hsa-miR-661	452	476	467	473
	hsa-miR-766	160	183	175	181