Simpler Evaluation of Predictions and Signature Stability for Gene Expression Data

Table 1

Annotation analysis of the signatures 1 to 10; the table entries show the number of genes found in each signature to include the function shown in the first column, with a blank indicating zero.

Function	1	2	3	4	5	6	7	8	9	10
Cell cycle		2	2	1		3	1	3
Cell Proliferation	1					2		1		1
DNA repair				1		1	1	1
Immune response		1		1		2	3	1		1
Cell Growth	1			2			1
Transcription	3	3	1	2	2	3	2	1	1	2
Cell-cell signal			1					1	1
Development		2		1	2				1
ATP binding	2	2	3		2	3	3	4	2	1
Nucleotide binding	3	4	3	1	1	4	2	4	2
DNA binding				2	2		1	1	1
Cell adhesion	1		1		2	2		3	1	1
Golgi stack	1				1			1	1
Kinase activity	2	3	3	1	2	1	1	1	1	1
Transferase activity	2	2	3		3	1	1	2	1	1