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Journal of Biomedicine and Biotechnology
Volume 2010 (2010), Article ID 915980, 8 pages
http://dx.doi.org/10.1155/2010/915980
Research Article

High-Throughput Sequencing of MicroRNAs in Adenovirus Type 3 Infected Human Laryngeal Epithelial Cells

1State Key Laboratory of Bioelectronics, School of Biological Science and Medical Engineering, Southeast University, SiPaiLou2#, Nanjing 210096, China
2Key Laboratory of Enteric Pathogenic Microbiology, Ministry of Health, Microbiological Laboratory, Jiangsu Center for Disease Prevention and Control (CDC), 172 Jiangsu Rd, Nanjing 210009, China

Received 11 February 2010; Revised 27 March 2010; Accepted 31 March 2010

Academic Editor: Momiao Xiong

Copyright © 2010 Yuhua Qi et al. This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

Linked References

  1. M. Echavarría, “Adenoviruses in immunocompromised hosts,” Clinical Microbiology Reviews, vol. 21, no. 4, pp. 704–715, 2008. View at Publisher · View at Google Scholar · View at Scopus
  2. J. A. Mahr and L. R. Gooding, “Immune evasion by adenoviruses,” Immunological Reviews, vol. 168, pp. 121–130, 1999. View at Publisher · View at Google Scholar · View at Scopus
  3. H. Guan, J. F. Williams, and R. P. Ricciardi, “Induction of neuronal and tumor-related genes by adenovirus type 12 E1A,” Journal of Virology, vol. 83, no. 2, pp. 651–661, 2009. View at Publisher · View at Google Scholar · View at Scopus
  4. G. Chinnadurai, “Modulation of oncogenic transformation by the human adenovirus E1A C-terminal region,” Current Topics in Microbiology and Immunology, vol. 273, pp. 139–161, 2004. View at Scopus
  5. K. A. Sharieff, D. Duncan, and Z. Younossi, “Advances in treatment of chronic hepatitis C: ‘pegylated’ interferons,” Cleveland Clinic Journal of Medicine, vol. 69, no. 2, pp. 155–159, 2002. View at Scopus
  6. Z. Wu, Y. Gao, L. Sun, P. Tien, and Q. Jin, “Quick identification of effective small interfering RNAs that inhibit the replication of coxsackievirus A16,” Antiviral Research, vol. 80, no. 3, pp. 295–301, 2008. View at Publisher · View at Google Scholar · View at Scopus
  7. K.-L. Wu, X. Zhang, J. Zhang, et al., “Inhibition of hepatitis B virus gene expression by single and dual small interfering RNA treatment,” Virus Research, vol. 112, no. 1-2, pp. 100–107, 2005. View at Publisher · View at Google Scholar · View at Scopus
  8. J. Yuan, P. K. M. Cheung, H. M. Zhang, D. Chau, and D. Yang, “Inhibition of coxsackievirus B3 replication by small interfering RNAs requires perfect sequence match in the central region of the viral positive strand,” Journal of Virology, vol. 79, no. 4, pp. 2151–2159, 2005. View at Publisher · View at Google Scholar · View at Scopus
  9. J. Huang, F. Wang, E. Argyris, et al., “Cellular microRNAs contribute to HIV-1 latency in resting primary CD4+ T lymphocytes,” Nature Medicine, vol. 13, no. 10, pp. 1241–1247, 2007. View at Publisher · View at Google Scholar · View at Scopus
  10. V. Nair and M. Zavolan, “Virus-encoded microRNAs: novel regulators of gene expression,” Trends in Microbiology, vol. 14, no. 4, pp. 169–175, 2006. View at Publisher · View at Google Scholar · View at Scopus
  11. S.-Y. Ying and S.-L. Lin, “Current perspectives in intronic micro RNAs (miRNAs),” Journal of Biomedical Science, vol. 13, no. 1, pp. 5–15, 2006. View at Publisher · View at Google Scholar · View at Scopus
  12. J. Skog, T. Wurdinger, S. van Rijn, et al., “Glioblastoma microvesicles transport RNA and proteins that promote tumour growth and provide diagnostic biomarkers,” Nature Cell Biology, vol. 10, no. 12, pp. 1470–1476, 2008. View at Publisher · View at Google Scholar · View at Scopus
  13. K. E. Resnick, H. Alder, J. P. Hagan, D. L. Richardson, C. M. Croce, and D. E. Cohn, “The detection of differentially expressed microRNAs from the serum of ovarian cancer patients using a novel real-time PCR platform,” Gynecologic Oncology, vol. 112, no. 1, pp. 55–59, 2009. View at Publisher · View at Google Scholar · View at Scopus
  14. S. Gilad, E. Meiri, Y. Yogev, et al., “Serum microRNAs are promising novel biomarkers,” PLoS ONE, vol. 3, no. 9, article e3148, 2008. View at Publisher · View at Google Scholar · View at Scopus
  15. L. A. Goff, J. Davila, M. R. Swerdel, et al., “Ago2 immunoprecipitation identifies predicted MicroRNAs in human embryonic stem cells and neural precursors,” PLoS ONE, vol. 4, no. 9, article e7192, 2009. View at Publisher · View at Google Scholar · View at Scopus
  16. T. D. Schmittgen and K. J. Livak, “Analyzing real-time PCR data by the comparative CT method,” Nature Protocols, vol. 3, no. 6, pp. 1101–1108, 2008. View at Publisher · View at Google Scholar · View at Scopus
  17. A. J. Kal, A. J. van Zonneveld, V. Benes, et al., “Dynamics of gene expression revealed by comparison of serial analysis of gene expression transcript profiles from yeast grown on two different carbon sources,” Molecular Biology of the Cell, vol. 10, no. 6, pp. 1859–1872, 1999. View at Scopus
  18. N. C. Lau, L. P. Lim, E. G. Weinstein, and D. P. Bartel, “An abundant class of tiny RNAs with probable regulatory roles in Caenorhabditis elegans,” Science, vol. 294, no. 5543, pp. 858–862, 2001. View at Publisher · View at Google Scholar · View at Scopus
  19. Y.-K. Kim and V. N. Kim, “Processing of intronic microRNAs,” The EMBO Journal, vol. 26, no. 3, pp. 775–783, 2007. View at Publisher · View at Google Scholar · View at Scopus
  20. S. Baskerville and D. P. Bartel, “Microarray profiling of microRNAs reveals frequent coexpression with neighboring miRNAs and host genes,” RNA, vol. 11, no. 3, pp. 241–247, 2005. View at Publisher · View at Google Scholar · View at Scopus
  21. A. Rodriguez, S. Griffiths-Jones, J. L. Ashurst, and A. Bradley, “Identification of mammalian microRNA host genes and transcription units,” Genome Research, vol. 14, no. 10, pp. 1902–1910, 2004. View at Publisher · View at Google Scholar · View at Scopus
  22. K. Okamura, J. W. Hagen, H. Duan, D. M. Tyler, and E. C. Lai, “The mirtron pathway generates microRNA-class regulatory RNAs in Drosophila,” Cell, vol. 130, no. 1, pp. 89–100, 2007. View at Publisher · View at Google Scholar · View at Scopus
  23. J. G. Ruby, C. H. Jan, and D. P. Bartel, “Intronic microRNA precursors that bypass Drosha processing,” Nature, vol. 448, no. 7149, pp. 83–86, 2007. View at Publisher · View at Google Scholar · View at Scopus
  24. H. Zhao, F. Granberg, L. Elfineh, U. Pettersson, and C. Svensson, “Strategic attack on host cell gene expression during adenovirus infection,” Journal of Virology, vol. 77, no. 20, pp. 11006–11015, 2003. View at Publisher · View at Google Scholar · View at Scopus
  25. A. Dorn, H. Zhao, F. Granberg, et al., “Identification of specific cellular genes up-regulated late in adenovirus type 12 infection,” Journal of Virology, vol. 79, no. 4, pp. 2404–2412, 2005. View at Publisher · View at Google Scholar · View at Scopus
  26. K. A. O'Donnell, E. A. Wentzel, K. I. Zeller, C. V. Dang, and J. T. Mendell, “c-Myc-regulated microRNAs modulate E2F1 expression,” Nature, vol. 435, no. 7043, pp. 839–843, 2005. View at Publisher · View at Google Scholar · View at Scopus
  27. L. He, J. M. Thomson, M. T. Hemann, et al., “A microRNA polycistron as a potential human oncogene,” Nature, vol. 435, no. 7043, pp. 828–833, 2005.