An Integrative Approach to Infer Regulation Programs in a Transcription Regulatory Module Network : Table 1

Table 1: Top twenty regulator-module interactions as given by the union method. *Records represent true positives at the value threshold of 0.05.


Rank	Regulator-module	value	Ranks from individual algorithms
Rank	Regulator-module	value	LIMMA	LeMoNe	Inferelator

1	DAL80-11*		1	130	88
	IME4-46		48	1	2906
	HAP1-13		3076	169	1

4	HAP4-7*		50	9	2
	MET32-11*		2	30	7
	DAL80-51*		4	2	10281

7	PHD1-36*		3	342	5
	HAP4-30		23	3	32
	MET32-27		9680	3702	3

10	TOS8-24*		49	4	111
10	GAT1-59*		802	5059	4

12	XBP1-10*		59	5	602
12	DAL82-48		5	49	7771

14	UGA3-11		6	509	59
	USV1-28		190	6	10281
	SKO1-57		4663	10026	6

17	GAT1-11*		34	7	28
17	ACA1-48		7	1048	7773

19	PDR3-13		12	8	10281
19	DAL80-40		8	367	27