Research Article

cDNA-SRAP and Its Application in Differential Gene Expression Analysis: A Case Study in Erianthus arundinaceum

Table 2

Sequence analysis of differential expressed genes screened in cDNA-SRAP analysis.

Clone IDAccession No.SRAP PrimerHomologous protein (Homology)Sequences Length (bp)

M2E13C7EU0717695-TGAGTCCAAACCCGGAGC-3
5-GACTGCGTACGAATTGGT-3
hypothetical protein (92%)269
M3E3T8EU0717705-TGAGTCCAAACCCGGAAT-3
5-GACTGCGTACGAATTGAC-3
ribonuclease III (40%)776
M4E5C9EU0717715-TGAGTCCAAACCCGGACC-3
5-GACTGCGTACGAATTAAC-3
transcription-repair factor (50%)271
M4E12C10EU0717725-TGAGTCCAAACCCGGACC-3
5-GACTGCGTACGAATTGTC-3
vacuolar protein (60%)342
M5E12T11EU0717735-TGAGTCCAAACCCGGAAG-3
5-GACTGCGTACGAATTGTC-3
autophagy-related protein (90%)185
M1E4T12EU0717745-TGAGTCCAAACCCGGATA-3
5-GACTGCGTACGAATTTGA-3
ethylene insensitive protein (89%)373
M2E15T15EU0717755-TGAGTCCAAACCCGGAGC-3
5-GACTGCGTACGAATTCTG-3
hypothetical protein (96%)300
M2E15C16EU0717765-TGAGTCCAAACCCGGAGC-3
5-GACTGCGTACGAATTCTG-3
aerobactin biosynthesis protein (37%)373
M2E15T17EU0717775-TGAGTCCAAACCCGGAGC-3
5-GACTGCGTACGAATTCTG-3
photosystem II protein (83%)408
M3E6T19EU0717785-TGAGTCCAAACCCGGAAT-3
5-GACTGCGTACGAATTGCA-3
glucose-transport member (32%)362
M3E6T20EU0717795-TGAGTCCAAACCCGGAAT-3
5-GACTGCGTACGAATTGCA-3
hypothetical protein (32%)361
M4E2T23EU0717805-TGAGTCCAAACCCGGACC-3
5-GACTGCGTACGAATTTGC-3
leucine rich repeat protein (33%)326
M4E2C24EU0717815-TGAGTCCAAACCCGGACC-3
5-GACTGCGTACGAATTTGC-3
ammonia monooxygenase (35%)427