Research Article

Codon Preference Optimization Increases Prokaryotic Cystatin C Expression

Table 1

Sequence comparison between wt- and co-cysC genes.

aaSSPGKPPRLVGGPMDASVEE
coTCTTCTCCGGGTAAACCGCCGCGTCTGGTTGGTGGTCCGATGGACGCTTCTGTTGAAGAA
wtTCCAGTCCCGGCAAGCCGCCGCGCCTAGTGGGAGGCCCCATGGACGCCAGCGTGGAGGAG
aaEGVRRALDFAVGEYNKASND
coGAAGGTGTTCGTCGTGCTCTGGACTTCGCTGTTGGTGAATACAACAAAGCTTCTAACGAC
wtGAGGGTGTGCGGCGTGCACTGGACTTTGCCGTCGGCGAGTACAACAAAGCCAGCAACGAC
aaMYHSRALQVVRARKQIVAGV
coATGTACCACTCTCGTGCTCTGCAGGTTGTTCGTGCTCGTAAACAGATCGTTGCTGGTGTT
wtATGTACCACAGCCGCGCGCTGCAGGTGGTGCGCGCCCGCAAGCAGATCGTAGCTGGGGTG
aaNYFLDVELGRTTCTKTQPNL
coAACTACTTCCTGGACGTTGAACTGGGTCGTACCACCTGCACCAAAACCCAGCCGAACCTG
wtAACTACTTCTTGGACGTGGAGCTGGGCCGAACCACGTGTACCAAGACCCAGCCCAACTTG
aaDNCPFHDQPHLKRKAFCSFQ
coGACAACTGCCCGTTCCACGACCAGCCGCACCTGAAACGTAAAGCTTTCTGCTCTTTCCAG
wtGACAACTGCCCCTTCCATGACCAGCCACATCTGAAAAGGAAAGCATTCTGCTCTTTCCAG
aaIYAVPWQGTMTLSKSTCQDA
coATCTACGCTGTTCCGTGGCAGGGTACCATGACCCTGTCTAAATCTACCTGCCAGGACGCT
wtATCTACGCTGTGCCTTGGCAGGGCACAATGACCTTGTCGAAATCCACCTGTCAGGACGCC

Note: wt: wild-type; co: codon-optimized; aa: amino acid.