Abstract

Impaired activity of the lysosomal enzyme glucocerebrosidase (GCR) results in the inherited metabolic disorder known as Gaucher disease. Current treatment consists of enzyme replacement therapy by administration of exogenous GCR. Although effective, it is exceptionally expensive, and patients worldwide have a limited access to this medicine. In Brazil, the public healthcare system provides the drug free of charge for all Gaucher’s patients, which reaches the order of $ 84 million per year. However, the production of GCR by public institutions in Brazil would reduce significantly the therapy costs. Here, we describe a robust protocol for the generation of a cell line producing recombinant human GCR. The protein was expressed in CHO-DXB11 (dhfr) cells after stable transfection and gene amplification with methotrexate. As expected, glycosylated GCR was detected by immunoblotting assay both as cell-associated (~64 and 59 kDa) and secreted (63–69 kDa) form. Analysis of subclones allowed the selection of stable CHO cells producing a secreted functional enzyme, with a calculated productivity of 5.14 pg/cell/day for the highest producer. Although being laborious, traditional methods of screening high-producing recombinant cells may represent a valuable alternative to generate expensive biopharmaceuticals in countries with limited resources.

1. Introduction

Glucocerebrosidase (GCR; EC 3.2.1.45) is a membrane-associated lysosomal enzyme [1] responsible for the hydrolysis of glucocerebroside to glucose and ceramide [2, 3]. Deficiency in the GCR activity results in Gaucher disease, the most common lysosomal storage disorder [4] characterized by an accumulation of the glycolipid in the monocyte-macrophage system [5, 6], mainly in liver, spleen and bone marrow. Gaucher disease is an autosomal recessive disorder [7], caused by more than 300 mutations in the GCR gene [5, 8], which results in a highly variable clinical presentation. According to the symptoms, Gaucher disease is historically classified into types I, II, and III [4, 6]. Type I (nonneuronopathic) is the most prevalent form [9], usually treated by enzyme replacement therapy (ERT) [10] via intravenous infusions of recombinant GCR produced in Chinese hamster ovary (CHO) cells [11]. ERT has proven to be safe and effective [8], reversing most symptoms of the disease in more than 4,500 patients worldwide [12]. This therapy was first introduced in 1991, using human placental-derived GCR (aglucerase, Ceredase) that was then replaced in 1994 by the recombinant form (imiglucerase, Cerezyme) [5, 12, 13], both manufactured by Genzyme Corporation (Cambridge, MA, USA), which was latterly acquired by Sanofi-Aventis (Montpellier, France). Currently, two new recombinant GCRs, regarded as biosimilar (or follow-on) preparations of imiglucerase [14], have received market approval [15, 16]: a gene-activated GCR (velaglucerase alfa, VPRIV, Shire Human Genetic Therapies, Cambridge, MA, USA) produced in a human fibroblast cell line [1719] and a plant-derived human GCR (taliglucerase alfa, Elelyso, Protalix Biotherapeutics, Carmiel, Israel) [20, 21]. Recently, a viral contamination occurred in the Genzyme’s bioreactor resulting in a global supply shortage of Cerezyme. As a consequence, both enzymes velaglucerase alfa and taliglucerase alfa had an accelerated market entry [22]. There is a great expectation that these and possibly other GCR formulations emerging in the near future could lead to a reduction in the price of the drug, which is extremely expensive [8] and hampers access to treatment [2, 14], especially in countries with limited resources [2325]. Here, we propose the cloning and expression of human GCR in CHO cells, in order to obtain high-expressing clones suitable for future GCR production at a lower cost by Institute Butantan (São Paulo, Brazil). The Institute Butantan has the public mission of producing sera, vaccines, and biopharmaceuticals at reduced costs for the Brazilian public healthcare system. The GCR cDNA was inserted into the pED dicistronic expression vector [26], and the recombinant protein was expressed in CHO-DXB11 cells, an auxotrophic line deficient in dihydrofolate reductase (DHFR) activity [27]. This is a well-characterized expression system [28, 29], commonly used in the biopharmaceutical industry for the production of glycoproteins [30, 31]. Cells were submitted to gene amplification with increasing methotrexate (MTX), a competitive inhibitor of DHFR, and clones were selected by traditional methods to screen high producers since current high-throughput techniques are not available to most undeveloped or emerging countries. The properly glycosylated GCR was detected in the culture supernatants and cellular extracts. Subcloning of the best producer clone followed by long-term culture in the MTX-free medium allowed the selection of stable CHO cell lines producing a functional enzyme. In addition to a successful protocol for the generation of stable cells producing recombinant human GCR, this study shows that traditional screening methods to search for high-producing cell lines for recombinant proteins can be a useful alternative for the production of biopharmaceuticals in emerging countries.

2. Materials and Methods

2.1. Recombinant DNA Procedures

Human GCR cDNA was obtained by purification of total RNA from ECV 304 cells (ATCC CRL 1998), followed by cDNA synthesis through RT-PCR (results not shown). The 1,565 bp cDNA encoding human GCR with its own signal peptide was amplified by PCR using the forward primer (5′  TCT AGA CCA TGG CTG GCA GCC TCA CA 3′) containing a XbaI restriction site and the Kozak sequence (sequence in bold), and the reverse primer (5′  GAA TTC TCA CTG GCG ATG CCA CAG 3′) containing an EcoRI restriction site. PCR was performed using Pfx DNA polymerase (Invitrogen), 0.2 mM of each deoxynucleoside triphosphate and 20 pmol of each primer. PCR amplification conditions were as follows: 94°C, 5 min; 30 cycles of 94°C, 1 min; 52°C, 45 s; 68°C, 3 min; a single step of 68°C, 7 min for final extension. PCR products were cloned into the pGEM-T vector (Promega). DH5α  E. coli competent cells were transformed with the ligation product for propagation and amplification of the recombinant DNA. Positive clones were confirmed by DNA sequencing using an automated DNA sequencer (ABI 3100) based on the dideoxytermination method [32]. The GCR cDNA was mutated to produce an enzyme with His in place of Arg at position 495 (procedures not shown) (Figure 1). The resulted plasmid pGEM-T-GCR was digested and the insert was subcloned into the XbaI and EcoRI sites of the pED expression vector [26], kindly provided by Dr. R. J. Kaufman (Howard Hughes Medical Institute, University of Michigan Medical Center), which provides high-expression levels of heterologous proteins in mammalian cells based on a dicistronic expression system. The pED vector carriers the encephalomyocarditis virus leader sequence, a putative internal ribossomal entry site, inserted upstream of the selectable and amplifiable gene marker dhfr (Figure 1).

2.2. Cell Culture, Stable Transfection and Gene Amplification

Cells of the lineage CHO-DXB11 (dhfr) [27] kindly provided by Dr. L. A. Chasin (Department of Biological Sciences, Columbia University), were maintained in Minimum Essential Medium Alfa Medium (α-MEM; Invitrogen) supplemented with 2 mM L-glutamine, antibiotics (100 U/mL penicillin, 100 μg/mL streptomycin, 0.25 μg/mL amphotericin B; Invitrogen) and 10% fetal bovine serum (FBS; Cultilab) (nonselective medium). Transfection of the plasmid pED-GCR (20 μg) was carried out in 100 mm tissue culture plates containing 106 cells by the calcium phosphate precipitation method [33]. The medium was replaced 48 h after transfection by α-MEM without nucleosides and supplemented with 10% dialyzed FBS (Invitrogen), antibiotics and L-glutamine (selective medium). After 2 weeks, 48 DHFR-positive clones (named as C 1 to C 48) were transferred into 12-well tissue culture plates using plastic inoculating loops and submitted to gene amplification with increasing MTX (Sigma) in the selective medium at concentrations of 0, 20, 50, 150, 350, 700, and 1200 nM. Cells were fed with fresh medium every 2-3 days and were passaged upon reaching confluence by trypsinization. In each selection step, cells were cultivated for at least 15 days before the MTX concentration was increased. To generate conditioned media and cell lysates for GCR expression analysis, cell clones were seeded into 6-well tissue culture plates containing selective medium and MTX. When semiconfluence was reached, cells were washed 3 times with PBS and the culture medium was replaced by selective medium lacking FBS. After incubation for 24 h, both the culture medium (conditioned medium) and the cells were collected, centrifuged at 300 ×g for 10 min, and stored at −80°C until use. Cell concentration was determined for each well with a Neubauer hemocytometer. For some analyses, cell culture supernatants were precipitated with 10% (v/v) trichloroacetic acid (TCA) and washed with cold acetone.

All cell cultures were carried out at 37°C in a humidified incubator with 5% CO2.

2.3. Single-Cell Subcloning Procedures

To isolate a cell line with the highest GCR productivity, cells from the best clone obtained at 700 nM MTX were subcloned by seeding 50, 100, and 200 cells into 3 separate 100 mm tissue culture plates and maintained in selective medium supplemented with MTX. After 15 days, 24 single-cell subclones (named as SC 12.1 to SC 12.24) were randomly selected, transferred to 12-well tissue-culture plates using plastic inoculating loops and expanded in the same medium for storage.

2.4. Clonal Stability Studies

The highest producer clone and the isolated subclones were cultured into 12-well tissue culture plates for 45 days in the absence of MTX selection pressure in nonselective medium. Cells were seeded into 6-well tissue culture plates to obtain conditioned media, as previously described. Samples were collected on days 15, 30, and 45 of the culture, and analyzed for secreted GCR. Cell concentration was determined by counting each well after collection of the supernatant.

2.5. Western Blotting Analysis

CHO-DXB11 cell supernatants (conditioned media) in 1-fold SDS-PAGE sample buffer and CHO cell pellets lysed in 2-fold SDS-PAGE sample buffer, containing 8 M urea, 1.5 mM EDTA and a protease inhibitor cocktail (Sigma) were fractionated on a 10% SDS-PAGE and electrotransferred to nitrocellulose or PVDF membranes (GE Healthcare). The membranes were blocked with 5% (w/v) nonfat dried milk in 0.1% (v/v) Tween 20, 150 mM NaCl, and 20 mM Tris-HCl pH 8.0 (TBS-T) for 16 h. Membranes were washed three times for 10 min with TBS-T, and further incubated with a 1 : 4,000 dilution of the murine anti-human GCR polyclonal antibodies [34], in 1% (w/v) bovine serum albumin (BSA)/TBS-T, for 1.5 h. The membranes were washed three times with TBS-T and incubated for 1 h with a proper dilution of anti-mouse IgG peroxidase conjugate (Sigma) in TBS-T, washed, and revealed with ECL or ECL Plus detection reagent (GE Healthcare), following manufacturer’s instructions.

2.6. Enzymatic Activity Assay

Hydrolytic activity of secreted GCR was determined fluorometrically with synthetic substrate 4-methylumbelliferyl-β-D-glucopyranoside (4-MUG; Sigma). The enzymatic reactions were performed in 0.2 mL of 0.2 M citrate phosphate buffer pH 5.5, containing 0.15% (v/v) Triton X-100 (Sigma), 0.125% (w/v) sodium taurocholate (Sigma), 5 mM 4-MUG, and conditioned media (collected as described above). After incubation for 1 h at 37°C, the reactions were stopped by adding 1 mL of 0.1 M glycine, 0.1 M NaOH pH 10.3. The product of enzymatic reactions 4-methylumbelliferone (4-MU) was measured with a spectrometer SLM-AMINCO Bowman Series II (Spectronic Instruments) excitation wavelength 365 nm, emission wavelength 445 nm. A standard curve was constructed using well-known concentrations of commercial enzyme Cerezyme and specific activity data (40 U/mg) presented by the manufacturer. Total protein concentrations were determined by absorbance at 205 nm [35].

2.7. GCR Quantification

Quantification of recombinant human GCR secreted from CHO-DXB11 cell subclones was estimated by a standard curve containing well-known concentrations of nonglycosylated recombinant GCR purified from E. coli [34] on a 10% SDS-PAGE, followed by western blotting and densitometry analysis. Conditioned media used for GCR quantification were collected as previously described. Densitometry analysis was performed using software from Eagle Eye still video system (Stratagene).

2.8. Endoglycosidase Digestion

Endo H and PNGase F digestion of recombinant GCR were performed in conditioned medium of the best producer subclone previously precipitated with 10% (v/v) TCA and washed with cold acetone. Samples were heated for 10 min at 100°C in glycoprotein denaturing buffer, and reactions were performed according to the manufacturer’s instructions (New England Biolabs). After incubation at 37°C for 16 h, reaction products were subjected to 10% SDS-PAGE followed by western blotting analysis, as described above.

3. Results

3.1. GCR Expression in CHO-DXB11 Cells

The human GCR cDNA containing its signal peptide sequence (1,565 bp) and the mutation R495H was cloned into the pED vector (Figure 1) for stable expression of GCR in CHO-DXB11 cells, with the aim of obtaining high-producing clones. Transfection efficiency using calcium phosphate was about 0,1%. Transfected clones were treated with increasing MTX concentrations to amplify the copy number of integrated cDNA. After the third round of amplification with 150 nM MTX, protein bands corresponding to glycosylated recombinant GCR were detected by western blotting analysis, using an anti-human GCR polyclonal antibody (Figure 2). Two to three GCR bands of 63–69 kDa were observed in the conditioned media (Figure 2(a)), while bands around 64 and 59 kDa were detected in cell lysates (Figure 2(b)). A 56 kDa band was detected (Figures 2(a) and 2(b)) corresponding to nonglycosylated recombinant GCR purified from E. coli [34] (positive control).

The amplification process was followed using increasing concentrations of MTX up to 700 nM in the culture medium. Utilization of MTX at higher concentration (1200 nM) was discontinued because it induced a high rate of cell death. At each increase step of MTX concentration, conditioned media were collected to evaluate the GCR expression by the cells. The western blotting analysis, performed with the anti-human GCR polyclonal antibody, showed that GCR expression levels were higher with increasing MTX concentration, which was evident in the last step with 700 nM MTX in the culture medium (Figure 3). The nonglycosylated recombinant GCR of 56 kDa purified from E. coli was used as positive control. These results suggested that 700 nM was the highest concentration of MTX suitable for the amplification of the cDNA and consequently the generation of high-producer clones for GCR. With this purpose, clones selected at 700 nM MTX were evaluated for GCR expression by western blotting analysis, and the clone 12 was chosen as the best expressing clone for GCR enzyme (data not shown).

3.2. Subcloning and Cell Culture in MTX-Free Medium

In order to evaluate the clonal stability for GCR expression, the high-producer clone (clone 12) was cultivated for 45 days in the absence of MTX selective pressure, and samples of conditioned medium were collected on days 15, 30, and 45. The western blotting assay showed a decreasing in the GCR expression over time (Figure 4(a)). After 45 days, the expression level of GCR by clone 12 was similar to that of nontransfected CHO-DXB11 cells (negative control), indicating absence of the recombinant protein expression. Since this analysis was carried out using a pool of cells, we hypothesized that most of the cells were unstable and only a few stably GCR expressing cells were present in the culture.

To identify stable high-producer cells from the amplified pool of cells derived from clone 12, a single-cell subcloning process was performed. The western blotting analysis of the conditioned culture medium of subclones cultivated for 45 days in the absence of MTX showed evident bands around 66 kDa corresponding to recombinant GCR in 5 subclones analyzed (Figure 4(b)). The GCR expression level observed for these subclones was similar to that detected for the clone 12 maintained with 700 nM MTX, and used as positive control. For 13 additional subclones analyzed in the absence of MTX, the GCR expression was not detected (data not shown).

3.3. Hydrolytic Activity of Recombinant GCR

The hydrolytic activity of secreted recombinant GCR was evaluated using the synthetic substrate 4-MUG for the 5 stable producer subclones identified in the western blotting analysis (Figure 4(b)). The presence of a functional GCR was observed for all subclones analyzed (Figure 5). Specific activities were calculated based on a standard curve containing well-known units of Cerezyme. GCR produced by subclones showed similar specific activities to commercial enzyme, taking into account that the protein had not been purified from the culture medium. The highest activity for GCR was detected in subclone 12.9 ( 2 8 . 5 4 ± 2 . 7 5 μmol 4-MU/min/mg).

3.4. GCR Expression Levels

Recombinant GCR secreted from the best CHO-DXB11 cell subclones was quantified by western blotting and densitometry analysis, based on a standard curve of nonglycosylated recombinant GCR purified from E. coli. As observed in Table 1, subclone 12.9 showed the highest specific productivity of recombinant GCR (5.14 pg/cell/day), followed by subclones 12.19 and 12.8 (3.22 and 1.84 pg/cell/day, resp.). These results are in agreement with the enzymatic activity assay that showed the same order of potency to hydrolyze the synthetic substrate 4-MUG by these subclones. The subclone 12.9 was then selected as the best producer of recombinant GCR in secreted form.

3.5. Glycosylation Analyses of Recombinant GCR

Recombinant GCR secreted from the highest producer subclone (SC 12.9) was characterized by digestion with Endo H and PNGase F. The western blotting (Figure 6(a)) showed a shift in the molecular mass of the protein from 66–69 kDa to 56 kDa after PNGase F digestion, which is in agreement with the expected size for nonglycosylated GCR. A 56 kDa band was also observed for recombinant GCR purified from E. coli (positive control). In the treatment with Endo H, GCR was partially resistant. A decrease of ~3 kDa in the 69 kDa protein band corresponding to the loss of N-linked high-mannose-type oligosaccharide was observed, with the probable retention of complex-type oligosaccharides terminating in galactose or sialic acid, which are not digested by Endo H. No recombinant GCR bands were detected in the culture medium of nontransfected CHO-DXB11 cells (negative control). Analysis using purified commercial enzyme (Cerezyme) of 60 kDa containing remodeled glycans (Figure 6(b)) confirmed the glycosylation status of GCR produced by CHO cells with a pattern of two bands (66 and 69 kDa), as observed by endoglycosidase treatment and described elsewhere [36, 37].

4. Discussion

Although ERT has become the standard of care for type I Gaucher disease [8, 38], its extremely high cost prevents it from being available to many patients in several countries [14, 2325]. In Brazil, the drug is imported and provided by the public healthcare system free of charge and the cost for just 610 Gaucher’s patients reaches the order of $ 84 million per year (Department of Science, Technology and Strategic Inputs, personal communication, 2010), a value not comparable with the expenses to treat other priority diseases. However, the high cost of treatment could be reduced with the production of GCR by public institutions. GCR is a glycoprotein of 497 amino acids with four of the five putative N-glycosylation sites usually occupied [39]. The glycosylation process was proven to be essential to produce a catalytically active enzyme [39, 40]. For this reason, GCR has been produced in eukaryotic cells that have the machinery required to perform the posttranslational modifications [4143]: Genzyme has used CHO-DG44 cells to produce imiglucerase [44], based on the dhfr amplifiable gene marker, while Shire and Protalix have developed a gene-activated expression system in a human fibroblast cell line and a plant (carrot) cell-based expression system to produce velaglucerase alfa and taliglucerase alfa [19, 21], respectively. In contrast to velaglucerase that have an amino acid sequence identical to that of the natural enzyme, imiglucerase, and taliglucerase contain a mutation at position 495 (an Arg to His substitution). In addition, taliglucerase sequence is modified at the N- and C-termini to add short tags of 2 and 7 amino acids, respectively. In this work, we describe the cloning of GCR cDNA containing the mutation R495H and the protein expression in CHO-DXB11, a cell line deficient in the DHFR synthesis, similar to CHO-DG44 cells.

The GCR cDNA was cloned into the pED dicistronic expression vector, which is commonly used to obtain high-expression levels of heterologous proteins in mammalian cells [4547], and positive clones were isolated and amplified with increasing MTX concentration up to 700 nM MTX. Probably due to the inability of the transfected cells to further amplify the dhfr gene [28], higher concentration of MTX (1200 nM) caused cell death. MTX selection of amplificants has been considered a major bottleneck in the production of biopharmaceuticals because many rounds are required to obtain cells with high-gene copy numbers [28, 48]. Currently, high-throughput methods to screen high-producer cells have been developed [48, 49]; including automated systems such as colony picking and the Cello systems [50]. However, many of these techniques are very expensive and nonaccessible to most undeveloped or emerging countries. In this regard, although time consuming and labor intensive, traditional methods of screening still represent an alternative for the production of recombinant glycoproteins at lower cost. Some significant problems of using traditional techniques are the relative low number of clones that can be characterized, and the need of downstream analysis of the product levels, since protein secretion cannot be measured on an individual cell basis [50].

Using traditional methods of screening for recombinant production clones, we demonstrated by immunoassays the expression of recombinant GCR either cell-associated (~64 and 59 kDa) or secreted into the culture medium (63–69 kDa), using a murine anti-human GCR polyclonal antibody [34]. GCR has a molecular mass ranging from 59 to 69 kDa [36], depending on the complexity of its glycan chains [1, 51], while the nonglycosylated GCR is a nonfunctional enzyme of 56 kDa [39]. Thus, the molecular masses detected here for recombinant human GCR are consistent with a properly glycosylated and active enzyme. However, to use in ERT, GCR should be modified in the oligosaccharide moieties to produce mannose-terminal carbohydrates, facilitating mannose receptor-mediated uptake into macrophages [52]. GCR produced in CHO cells and commercialized by Genzyme is sequentially treated with three exoglycosidases during purification process to remove sialic acid, galactose, and N-acetylglucosamine residues [53, 54]. These steps have to be further included in our future production process of a therapeutically functional enzyme in CHO cells in order to obtain a biosimilar GCR.

To evaluate the stability of the producer clone, MTX was withdrawn from the culture medium and an unexpected decreased in the GCR expression was observed. Long-term culture in the absence of selective pressure may result in the loss of transgene copy number [55, 56], and reduction or elimination in the gene-specific transcription (gene silencing) [49, 57], according to the site of transgene integration. Both processes may result in the prevalence of cells expressing lower levels of the recombinant protein due to the higher growth rate presented by these cells when compared with the high producers [58], despite the fact that both have potentially been derived from the same single cell [56, 57].

Recloning was then performed in order to evaluate the heterogeneity of the producer clone, and stable subclones expressing a functional GCR with level of biological activity similar to that of Cerezyme were identified. Although the highest productivity achieved for secreted GCR was calculated as 5.14 pg/cell/day, higher expression levels have been reported for other recombinant proteins in CHO cells [45, 47]. Here, it should be taken into account the fact that GCR is a membrane-associated glycoprotein secreted at low level or rather not secreted under natural conditions [37]. Despite the importance of the production of GCR for the treatment of ERT, there is a lack of data in the literature describing the expression of recombinant GCR in CHO cells. Leonova and Grabowski [37] reported the intracellular degradation and secretion processes of GCR in stably transfected CHO cells, and Genzyme’s data concerning the production of imiglucerase in CHO-DG44 cells were only summarily described by Hoppe [59]. Additionally, some other information can be found in the patent files [44, 53]. Here, we report a robust protocol for the production of recombinant GCR in CHO cells along with the all the steps to obtain a stable cell line expressing the enzyme.

In conclusion, we showed the generation of stable CHO cells producing a functional recombinant human GCR, properly glycosylated and secreted, using low-throughput methods for selection of high-producing clones. Efforts to develop a process for producing GCR by nonprofit institution may possibly result in reduced cost of treating Gaucher disease in the future thus supplying the needs of the Brazilian public healthcare system. Furthermore, the traditional screening strategies shown here can be useful for other emerging countries to produce biopharmaceuticals and other biological products of high cost-effectiveness and public health value.

Acknowledgments

The authors are grateful to Dr. Geraldo Santana Magalhães (Laboratório de Imunopatologia, Instituto Butantan) and Dr. Eneas de Carvalho (Centro de Biotecnologia, Instituto Butantan) for helpful discussions, to Dr. Rosa Maria Chura-Chambi (Centro de Biotecnologia, Instituto de Pesquisas Energéticas e Nucleares) for helping them with the transfection and gene amplification procedures, and to Dr. Henrique Roman Ramos (Centro de Biotecnologia, Instituto Butantan) for assistance in the fluorometric analysis. This work was supported by grants from FAPESP (Fundação de Amparo à Pesquisa do Estado de São Paulo), CNPq (Conselho Nacional de Desenvolvimento Científico e Tecnológico), and Fundação Butantan.