Elucidation of Novel Structural Scaffold in Rohu TLR2 and Its Binding Site Analysis with Peptidoglycan, Lipoteichoic Acid and Zymosan Ligands, and Downstream MyD88 Adaptor Protein

Table 3

Sequence identities between common carp MyD88-TIR (target) and human MyD88-TIR (template).

Position	Identity (%)	Position	Identity (%)
𝛽A	100	CC loop	66.66
AA loop	80	𝛽D	60
𝛼A	69.23	DD loop	70.58
𝛽B	100	𝛽E	100
BB Loop	86.66	EE loop	66.66
𝛼B	100	𝛼E	68.75
𝛽C	85.71