Table 5: Transcription factors recovered in subnetworks.

Gene symbolGene titleSubnetworkBehavior

TNNI2Troponin I type 2 (skeletal, fast)Sub-1Down
SMAD4SMAD family member 4Sub-4Up
TP53Tumor protein p53Sub-4Up
ATF2Activating transcription factor 2Sub-4Up
WT1Wilms, tumor 1Sub-4Up
SOX4SRY- (sex determining region Y-) box 4Sub-4Up
TFAP2CTranscription factor AP-2 gamma (activating enhancer binding protein 2 gamma)Sub-4Up
ATXN3Ataxin 3Sub-6Up
SALL2Sal-like 2 (Drosophila)Sub-6Up
EWSR1Ewing sarcoma breakpoint region 1Sub-6, sub-7Up
SSBP2Single-stranded DNA binding protein 2Sub-7Up
GFI1BGrowth factor independent 1B transcription repressorSub-11Down
ABL1c-abl oncogene 1, receptor tyrosine kinaseSub-16Up
XRCC6X-ray repair complementing defective repair in Chinese hamster cells 6 (Ku autoantigen, 70 kDa)Sub-16Up