Methodology Report

A Novel Framework for the Identification and Analysis of Duplicons between Human and Chimpanzee

Table 6

GO analysis of molecular function at levels 2 and 3. values are computed by chi-square test with Bonferroni correction.

GO term GO category P value Obs./exp.

Level 2
GO:0003824 Catalytic activity 1.78
GO:0005488 Binding 0.62
GO:0005215 Transporter activity 2.08
GO:0030528 Transcription regulator activity 0.37
GO:0015457 Auxiliary transport protein activity 3.92
GO:0005198 Structural molecule activity 0.40

Level 3
GO:0022857 Transmembrane transporter activity 3.10
GO:0004133 Glycogen debranching enzyme activity 71.2
GO:0016740 Transferase activity 2.52
GO:0022892 Substrate-specific transporter activity 2.83
GO:0043167 Ion binding 0.12
GO:0003676 Nucleic acid binding 0.23
GO:0000166 Nucleotide binding 0.15
GO:0016491 Oxidoreductase activity 2.31
GO:0005515 Protein binding 0.67
GO:0016787 Hydrolase activity 1.61
GO:0016787 Transcription factor activity 0.07
GO:0016787 Channel regulator activity 4.97
GO:0016787 Bacterial binding 8.21
GO:0016787 Cell surface binding 5.93
GO:0016787 Peptide binding 1.90
GO:0016787 Signal transducer activity 1.35