Research Article

Paired Ductal Carcinoma In Situ and Invasive Breast Cancer Lesions in the D-Loop of the Mitochondrial Genome Indicate a Cancerization Field Effect

Table 2

HV1 somatic mutations are bolded, while mutations persisting in all patient samples are also italicized. Patient histologies are compared to the corresponding sequence of their germplasm or blood (B) to detect mutations. Only those sites appearing in all histologies for a given patient are identified.

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RCRSTTCTCACTTCCTTTGTTG

33 BTTCTTACTTTCTCTGTTG
33 MIBCNNCTC ACC TTCTT C GTTG
33 MDCIS TYCTC ACY TYCTY Y GTTG

36 BTTTTCACTTCCTTTATTG
36 LIBCTTC Y CAY Y TY Y TTY G TY R
36 LDCISTTC Y CAY Y TT Y TTY G TY R

43 BCTCTCACTTCCCTTGTTG
43 BIBCT TCY CACYTYCT TTGTTG
43 BDCIS T TCY CACYTCCT TTGTTG
43 LDCIST CCY CAYTTCYT YTGTYG

46 B TCCTCACTTCCTTTGCTG
46 BIBCTT CY CAY TTCY TTTGT Y R
46 BDCISTT CC CAT TTCT TTTGT C A

57 BTTCT CACTTCCTTTGTTG
57 LIBCNNCY CATTTCT TTTGTCA
57 LDCIS TTCY CACYTYY TTYGTTR

64 BTTCCCACTCCCTTTGTTG
64 MIBC1NNCCCAYYY YYTTYGTYR
64 MIBC2TTCYCAYTT CYTTTGTYR
64 MDCIS TTCYCACYY YCTTYGTTG

74 BTTCTCGCTTCCTCTGTTG
74 BIBCTTCYCA YTTCYTT TGTYR
74 BDCISTTCYCA TTTCYTT TGTYR
74 MIBCTTCTCA CYTYCTT TGTTG
74 MDCISTTCYCA YTTCYTT TGTYR

83 BTTCCCACTTCCTTTGTTG
83 BIBC TTCT CAYTTCCTTTGTTG
83 BDCISTTCT CACCTCCTTCGTTG

89 BTTCTCACCTCCCTCGTTG
89 BIBCNNCY CAY T TCY T TT GTY R
89 BDCISNNCY CAY Y TYY T YY GTY R

94 BCTCCCACTTTTTTTGTTG
94 BIBCT TCT CACY TCC TTY GTTG
94 BDCIST TCT CACC TTC TTC GTTG

IBC: invasive breast carcinoma, DCIS: ductal carcinoma in situ. Prefixes: B: biopsy, L: lumpectomy, and M: mastectomy. The revised Cambridge reference sequence (RCRS) is used as a standard comparison. The first 2 and/or 3 digits for each site have been removed to avoid redundancy.