Systems Approaches to Modeling Chronic Mucosal Inflammation

Figure 3

Effect of EMT on signaling pathways. (a) Heat map of gene expression. A time series of the TNFα stimulation of the HSAECs stimulated in the absence or presence of TGFβ-induced type II EMT. Data are Z-score transformed and relative to unstimulated normal HSAECs and expressed as standard deviation (SD) units from the row mean. Scale for SD deviation is shown at the bottom. Gene abbreviations are shown in Table 1. The white rectangles represent the missing data where the fold changes and Z-scores could not be calculated.