|
Representative strains of ITS haplotypes
(number of isolates per haplotype) | Accession
number | Phylogenetic
group | Closet described species
and identity (%) | Accession
number | Sampling
date | Sample
code | Sampling sites
(number of isolates per site) | Type of
matrix |
|
| H1-BMG G12 (1) | KF179184 | Proteobacteria | Halomonas boliviensis (98%) | EU_308325.1 | February 2010 | BDV1.8.A | Ksar Ghilane | Mud |
| H2-BMG F5 (2) | KF179185 | Firmicutes | Bacillus saliphilus (96%) | HM_811185.1 | February 2010 | BDV1.8.B | Ksar Ghilane | Black sediment |
| H3-BMG D30 (3) | KF179190 | Proteobacteria | Halomonas janggokensis (100%) | EU_308361.1 | February 2010 | BDV1.8.C | Ksar Ghilane | Thermomineral water |
| H4-BMG D39 (3) | KF179189 | Firmicutes | Bacillus saliphilus (95%) | HM_811185.1 | February 2010 | BDV1.8.C | Ksar Ghilane | Thermomineral water |
| H5-BMG D32 (3) | KF179187 | Actinobacteria | Nesterenkonia lacusekhoensis (98%) | GQ_064877.1 | February 2010 | BDV1.4
BDV6.2 | Ksar Ghilane (1)
Chottel Douz (2) | Sand with vegetation
Salt crust |
| H6-BMG G3 (1) | KF179188 | Firmicutes | Bacillus saliphilus (95%) | HM_811185.1 | February 2010 | BDV1.8.B | Ksar Ghilane | Black sediment |
| H7-BMG F7 (1) | KF179205 | Proteobacteria | Halomonas gomseomensis (99%) | EU_308352.1 | February 2010 | BDV4.2 | Sabkhet Ennaouel | Saline water |
| H8-BMG ED18 (4) | KF179213 | Firmicutes | Salinicoccus alkaliphilus (98%) | GU_363531.1 | February 2008 | BDV6.3 | Chottel Douz | Algal biofilm |
| H9-BMG D26 (6) | KF179191 | Proteobacteria | Halomonas janggokensis (100%) | EU_308361.1 | February 2010 | BDV1.8.A
BDV6.3 | Ksar Ghilane (1)
Chottel Douz (5) | Mud
Algal biofilm |
| H10-BMG F8 (3) | KF179206 | Proteobacteria | Halomonas taeanensis (98%) | HQ_190038 | February 2010 | BDV4.1
BDV17.3/18.3 | Sabkhet Ennaouel (1)
Chottel Djerid (2) | Sediment with salt crust
Sediment with salt |
| H11-BMG G6 (1) | KF179174 | Proteobacteria | Halomonas elongata (99%) | NR_029227.1 | February 2010 | BDV18.3 | Chottel Djerid | Black sediment |
| H12-BMG ED65 (7) | KF179199 | Firmicutes | Salimicrobium luteum (100%) | FJ_157154.1 | February 2008 | BDIII-11.A1/B1
BDV6.2 | Sabkhet El Melah (6)
Chottel Douz (1) | Sediment with salt
Salt crust |
| H13-BMG ED6 (3) | KF179211 | Firmicutes | Oceanobacillus iheyensis (98%) | GU_326361.1 | February 2008 | BDV6.2 | Chottel Douz | Salt crust |
| H14-BMG F4 (1) | KF179175 | Actinobacteria | Nesterenkonia halobia (99%) | EF_153433.1 | February 2010 | BDV20.1 | Chottel Djerid | Sand |
| H15-BMG E7 (1) | KF179194 | Firmicutes | Salinicoccus hispanicus (99%) | NR_025645.1 | February 2008 | BDIII-11.C3 | Sabkhet El Melah | Salicornia rhizosphere |
| H16-BMG E6 (1) | KF179210 | Firmicutes | Salinicoccus alkaliphilus (97%) | GU_363531.1 | February 2008 | BDV6.3 | Chottel Douz | Algal biofilm |
| H17-BMG ED88 (11) | KF179193 | Firmicutes | Salinicoccus hispanicus (99%) | NR_025645.1 | February 2008 | BDIII-11.C3
BDV6.3/BDV6.2 | Sabkhet El Melah (7)
Chottel Douz (4) | Salicornia rhizosphere
Algal biofilm/salt crust |
| H18-BMG G2 (1) | KF179183 | Firmicutes | Piscibacillus salipiscarius (98%) | HM_222702.1 | February 2010 | BDV19.6 | Chottel Djerid | Sediment and salt |
| H19-BMG E11 (4) | KF179202 | Firmicutes | Halobacillus litoralis (100%) | HM_636928.1 | February 2008 | BDIII-11.B1/A2
BDV20.2 | Sabkhet El Melah (3)
Chottel Djerid (1) | Sediment with salt crust
Sediment (sandy soil) |
| H20-BMG D102 (1) | KF179176 | Proteobacteria | Halomonas elongata (99%) | NR_029227.1 | February 2010 | BDV18.3 | Chottel Djerid | Sediment |
| H21-BMG ED25 (1) | KF179200 | Actinobacteria | Arthrobacter gangotriensis (99%) | FR_749771.1 | February 2008 | BDIII-11.A1 | Sabkhet El Melah | Sediment with salt |
| H22-BMG D91 (5) | KF179178 | Proteobacteria | Halomonas janggokensis (100%) | EU_308361.1 | February 2010 | BDV17.2
BDV1.8.A/1.8.C | Chottel Djerid (1)
Ksar Ghilane (4) | Salt crust
Mud/thermomineral water |
| H23-BMG ED46 (2) | KF179192 | Firmicutes | Salinicoccus hispanicus (99%) | NR_025645.1 | February 2008 | BDIII-11.C3
BDV6.3 | Sabkhet El Melah (1)
Chottel Douz (1) | Salicornia rhizosphere
Algal biofilm |
| H24-BMG D115 (15) | KF179177 | Actinobacteria | Nesterenkonia halobia (99%) | EF_153433.1 | February 2010 | BDV20.1/19.6
BDV1.4
BDV4.2/4.1 | Chottel Djerid (4)
Ksar Ghilane (7)
Sabkhet Ennaouel (4) | Sand
Sand with vegetation
Saline water/salt crust |
| H25-BMG ED60 (2) | KF179208 | Firmicutes | Salinicoccus hispanicus (99%) | NR_025645.1 | February 2008 | BDV6.3
BDIII-11.C3 | Chottel Douz (1)
Sabkhet El Melah (1) | Algal biofilm
Salicornia rhizosphere |
| H26-BMG G7 (2) | KF179182 | Proteobacteria | Halomonas elongata (99%) | NR_029227.1 | February 2010 | BDV20.2 | Chottel Djerid | Sediment |
| H27-BMG E9 (6) | KF179209 | Firmicutes | Oceanobacillus iheyensis (98%) | HM_854234.1 | February 2008 | BDV6.2 | Chottel Douz | Salt crust |
| H28-BMG G8 (1) | KF307740 | Actinobacteria | Leucobacter chromiireducens (99%) | EF_153433.1 | February 2008 | BDIII-11.A2 | Sabkhet El Melah | Sediment with water and salt crust |
| H29-BMG E4 (1) | KF179215 | Proteobacteria | Halomonas ventosae (99%) | FM_210950.1 | February 2008 | BDV6.1 | Chottel Douz | Saline water |
| H30-BMG G11 (1) | KF179180 | Proteobacteria | Halomonas subterranea (99%) | EU_308353.1 | February 2010 | BDV17.3 | Chottel Djerid | Sediment |
| H31-BMG ED15 (3) | KF179214 | Firmicutes | Oceanobacillus picturae (98%) | HM_179167.1 | February 2008 | BDV6.3
BDIII-11.B1 | Chottel Douz (2)
Sabkhet El Melah (1) | Algal biofilm
Sediment with salt |
| H32-BMG E2 (2) | KF179198 | Firmicutes | Brevibacillus agri (99%) | HM_355618.1 | February 2008 | BDIII-11.A1 | Sabkhet El Melah | Sediment with salt |
| H33-BMG E1 (1) | KF179203 | Firmicutes | Halobacillus litoralis (100%) | HM_636928.1 | February 2008 | BDIII-11.A2 | Sabkhet El Melah | Sediment with water and salt crust |
| H34-BMG E5 (2) | KF179197 | Firmicutes | Piscibacillus salipiscarius (98%) | HM_222702.1 | February 2008 | BDIII-11.A1 | Sabkhet El Melah | Sediment with salt |
| H35-BMG ED37 (1) | KF179195 | Firmicutes | Salinicoccus hispanicus (99%) | NR_025645.1 | February 2008 | BDIII-11.C3 | Sabkhet El Melah | Salicornia rhizosphere |
| H36-BMG D109 (1) | KF179179 | Firmicutes | Halobacillus profundi (99%) | EU_482426.1 | February 2010 | BDV19.6 | Chottel Djerid | Sediment and salt |
| H37-BMG E3 (1) | KF179207 | Proteobacteria | Halomonas ventosae (99%) | FM_210950.1 | February 2008 | BDV6.1 | Chottel Douz | Saline water |
| H38-BMG G4 (2) | KF179181 | Firmicutes | Halobacillus litoralis (100%) | HM_636928.1 | February 2010 | BDV17.3 | Chottel Djerid | Sediment |
| H39-BMG F11 (1) | KF179186 | Proteobacteria | Halomonas ventosae (99%) | AB_617544.1 | February 2010 | BDV1.8.B | Ksar Ghilane | Black sediment |
| H40-BMG D16 (1) | KF179204 | Proteobacteria | Halomonas gomseomensis (99%) | EU_308352.1 | February 2010 | BDV4.2 | Sabkhet Ennaouel | Saline water |
| H41-BMG E8 (3) | KF307741 | Firmicutes | Marinococcus halophilus (99%) | FJ_887949.1 | February 2008 | BDIII-11.C3 | Sabkhet El Melah | Salicornia rhizosphere |
| H42-BMG F2 (1) | KF179201 | Proteobacteria | Halomonas boliviensis (98%) | EU_308325.1 | February 2008 | BDIII-11.C3 | Sabkhet El Melah | Salicornia rhizosphere |
| H43-BMG ED33 (8) | KF179196 | Firmicutes | Virgibacillus halodenitrificans (99%) | AM_950296.1 | February 2008 | BDIII-11.B1/C3 | Sabkhet El Melah (6) | Sediment with salt crust/salicornia rhizosphere |
| BDV6.2 | Chottel Douz (2) | Salt crust |
| H44-BMG D12 (1) | KF179212 | Firmicutes | Oceanobacillus iheyensis (98%) | HM_854234.1 | February 2008 | BDV6.2 | Chottel Douz | Salt crust |
|
