Research Article
SeedSeq: Off-Target Transcriptome Database
Table 2
Selected siRNAs and their off-target overlap with on-targets of miRNAs from tarbase.
| On-target gene symbol | siRNA antisense strand | siRNA id | Off-target gene symbol | Target of endogenous miRNA |
| WNK3 | AAAUACUGACAAACGUGAGGC | s35278 | ZEB1/TCF8 | hsa-miR-200b | STRADB | AAAUACUGAUAUCCAAUGGGC | s30875 | ZEB1/TCF8 | hsa-miR-200b | MAPK4 | UAAUGCUGAUCAACGAUCCUU | SI00606011 | BACH1 | hsa-miR-155 | MAPK4 | UAAUGCUGAUC AACGAUCCUU | SI00606011 | TP53INP1 | hsa-miR-155 | WNK3 | AAAUACUGACAAACGUGAGGC | s35278 | RERE | hsa-miR-429 | PLXNA3 | AAAGUGCUUCCAUUGAUGAUG | s30979 | Cyclin D2 | hsa-miR-302b | PLXNA3 | AAAGUGCUUCCAUUGAUGAUG | s30979 | MBNL2 | hsa-miR-302d | PLXNA3 | AAAGUGCUUCCAUUGAUGAUG | s30979 | VEGF | hsa-miR-372 | PLXNA3 | AAAGUGCUUCCAUUGAUGAUG | s30979 | APP | hsa-miR-520c-3p | TYRO3 | UUGGCACUAAAGGUCACCGUU | SI00288344 | Mitf | hsa-miR-96 | ITPKB | UUGGUCCAUAGUCUCCCUCUG | SI04435592 | KCNQ1 | hsa-miR-133a | TNK1 | UAAUGCUCCAGGAUGCGCCAG | SI03649674 | MEIS1 | hsa-miR-155 | PACSIN1 | UUGGUCCCUCAGAUGGGCCUG | SI00127918 | Pitx3 | hsa-miR-133b |
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