Mixing Energy Models in Genetic Algorithms for On-Lattice Protein Structure Prediction

Algorithm 7

The pseudocode of random initialisation: initialise( ).

(1) 𝐴𝐴[0]⟵AminoAcid(0,0,0)

(2) for  a  number of times  do

(3)    for (𝑖=1  to  𝑠𝑒𝑞𝐿𝑒𝑛𝑔𝑡ℎ−1)  do

(4)    𝑘⟵getRandom(12)

(5)     𝑛𝑜𝑑𝑒⟵𝐴𝐴[𝑖−1]+𝑏𝑎𝑠𝑖𝑠𝑉𝑒𝑐[𝑘]

(6)    if  node is not free  then  break

(7)    𝐴𝐴[𝑖]⟵AminoAcid(𝑛𝑜𝑑𝑒)

(8)    if  full structure found  then  return  𝐴𝐴[]

(9) return 𝐴𝐴[] having a deterministic structure;