Seroprevalence of Antibodies against Pkn1, a Novel Potential Immunogen, in Chlamydia trachomatis-Infected Macaca nemestrina and Human Patients

Table 1

Bioinformatic Based Prediction of (a) Pkn1, (b) OmpA and (c) LigA for B cell epitopes. Threshold setting was kept at default value of 0.51.

(a) Pkn1

Rank	Sequences	Start position	Score
1	SLKEDLRCAHRHRNNP	583	0.94
2	YEWCQDWYSYDFYENS	543	0.93
2	FFSSDTTPVMSYPANI	517	0.93
3	DFYENSALEPDSPQGP	553	0.90
4	PGAINSTYGFRCAKDV	598	0.89
4	YGASSYASWIGKRLPS	472	0.89
5	YLLVGAFPWGAFPKPS	215	0.88
6	GGKLGMRYPTGEDVDK	497	0.87
7	IIEPGYAKHPVVGVTW	456	0.86

(b) OmpA

Rank	Sequences	Start position	Score
1	EGFGGDPCDPCATWCD	41	0.95
2	CATWCDAISMRVGYYG	51	0.92
3	TGTKDASIDYHEWQAS	259	0.91
4	YHEWQASLALSYRLNM	268	0.90
5	TGNSAAPSTLTARENP	92	0.89
6	IAVGTTIVDADKYAVT	359	0.87
7	GRHMQDAEMFTNAACM	110	0.87
8	GAEGQLGDTMQIVSLQ	332	0.86

(c) LigA

Rank	Sequences	Start position	Score
1	CQREQGKLEFANPRNA	178	0.94
2	TELVEHDRRYYVLNQP	7	0.92
3	CSDIFALAEEDLKQVP	465	0.92
4	VERIREIEEMRAALPM	255	0.91
5	QVGKTGILTPVAELAP	318	0.90
6	DRSIQNLLASIAGAKK	475	0.88
7	SEPWKMPSLCPVCHEP	387	0.88
8	MRLPQEAPEDLEVRGE	149	0.88