Research Article
Evaluation and Comparison of Multiple Aligners for Next-Generation Sequencing Data Analysis
Table 2
Detailed information for reference genomes and real-life short-read datasets from Illumina sequencing platform.
| Genome | Reads ID | Reads length (bp) | Read count | Genome size | Genome version (ID) |
| PhiX | ERR007488 | 36 | 4516934 | <1 Mbp | NC_001422.1 (NCBI) | E. coli | SRR023978 | 51 | 9575373 | 5 Mbp | NC_000913.2 (NCBI) | S. cerevisiae | SRX011891 | 36 | 10995605 | 12 Mbp | sacCer2 (UCSC) | D. melanogaster | SRR001815 | 36 | 10760364 | 172 Mbp | dm3 (UCSC) | Oryza sativa | DRR000023 | 32 | 18443432 | 388 Mbp | NCBI | Homo sapiens | SRR037152 | 35 | 4761769 | 3263 Mbp | hg18 (UCSC) | Homo sapiens | SRX003935 | 32 | 18424533 | 3263 Mbp | hg18 (UCSC) |
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