Research Article

Evaluation and Comparison of Multiple Aligners for Next-Generation Sequencing Data Analysis

Table 2

Detailed information for reference genomes and real-life short-read datasets from Illumina sequencing platform.

GenomeReads IDReads length (bp)Read countGenome sizeGenome version (ID)

PhiX ERR007488364516934<1 MbpNC_001422.1 (NCBI)
E. coli SRR0239785195753735 MbpNC_000913.2 (NCBI)
S. cerevisiae SRX011891361099560512 MbpsacCer2 (UCSC)
D. melanogaster SRR0018153610760364172 Mbpdm3 (UCSC)
Oryza sativa DRR0000233218443432388 MbpNCBI
Homo sapiens SRR0371523547617693263 Mbphg18 (UCSC)
Homo sapiens SRX00393532184245333263 Mbphg18 (UCSC)