Comparison of Long Noncoding RNA and mRNA Expression Profiles in Mesenchymal Stem Cells Derived from Human Periodontal Ligament and Bone Marrow

Table 3

Twenty genes identified in the BMSC CNC network with high degrees of connectivity and clustering coefficients (degree ≥29, clustering coefficient ≥0.7).

Gene symbol	Description	Clustering coefficient	Degree	Style	Type
CXCL12	Chemokine (C-X-C motif) ligand 12	0.75568182	33	Up	mRNA
PRIM1	Primase, DNA, polypeptide 1 (49 kDa)	0.87931034	29	Up	mRNA
LIFR	Leukemia inhibitory factor receptor alpha	0.87931034	29	Down	mRNA
MAD2L1	MAD2 mitotic arrest deficient-like 1 (yeast)	0.87931034	29	Up	mRNA
TGFBR1	Transforming growth factor, beta receptor 1	0.87931034	29	Down	mRNA
PARP1	Poly(ADP-ribose) polymerase 1	0.87931034	29	Up	mRNA
FGF5	Fibroblast growth factor-5	0.87931034	29	Up	mRNA
CCNE2	Cyclin E2	0.87931034	29	Up	mRNA
TTK	TTK protein kinase	0.87931034	29	Up	mRNA
RBL1	Retinoblastoma-like 1 (p107)	0.87931034	29	Up	mRNA
POLE2	Polymerase (DNA directed), epsilon 2 (p59 subunit)	0.87931034	29	Up	mRNA
CDK1	Cyclin-dependent kinase 1	0.87931034	29	Up	mRNA
MCM3	Minichromosome maintenance complex component 3	0.87931034	29	Up	mRNA
CDK2	Cyclin-dependent kinase 2	0.87931034	29	Up	mRNA
BMPR1B	Bone morphogenetic protein receptor, type IB	0.87931034	29	Down	mRNA
HIST1H2BO	Histone cluster 1, H2bo	0.80295567	29	Up	mRNA
F10	Coagulation factor X	0.80295567	29	Up	mRNA
BDKRB1	Bradykinin receptor B1	0.80295567	29	Up	mRNA
GSTM5	Glutathione S-transferase mu 5	0.80295567	29	Up	mRNA
PRPH2	Peripherin 2 (retinal degeneration, slow)	0.80295567	29	Down	mRNA