Developing eThread Pipeline Using SAGA-Pilot Abstraction for Large-Scale Structural Bioinformatics

Table 4

Breaking the time-to-solutions of the main processing step into subtasks. Four subtasks corresponding chain and domain libraries and their postprocessing are measured along with VM launch times. Results are with pfTools. Units are in minutes.

VM launch	Chain	Domain	Chain postprocessing	Domain postprocessing
t1.micro
1.9	316.5	331.6	33.4	21.5
m1.small
1.3	137.1	90.1	9.7	7.9
m1.medium
1.3	62.2	42.9	6.1	4.4
m1.large
1.2	31.1	21.5	3.4	2.7
c1.medium
1.3	32.8	22.5	3.9	3.1
c1.xlarge
1.3	9.5	6.5	1.1	1.2
hi1.4xlarge
1.5	7.7	5.3	1.3	1.2