Bioinformatic Prediction of WSSV-Host Protein-Protein Interaction

Figure 3

A compared schematic structure of syndecan from shrimp (FcSDC) and syndecan-1 (accession number: NP_001006947) from Homo sapiens (HsSDC1). The signal peptide (SP), syndecan conserved domains (transmembrane domain, C1 domain and C2 domain), and syndecan-type specific domains (ectodomain and V domain) were displayed with the number of their boundary amino acid residues. The potent glycosylation sites, including SG sites and predicted O-linked glycosylation sites, were shown. The sequence information of C1 domain and C2 domain was also listed.