AmalgamScope: Merging Annotations Data across the Human Genome
Figure 3
Txt and Html formats of the merged file are produced. Three breast cancer TCGA samples were uploaded and merged. Each sample is derived by a different platform, namely, Agilent gene expression microarray, Illumina RNA-Seq, and Affymetrix copy number variant data. (a) The tabulated merged file includes chromosomal id, start/end positions of the identified regional units (StartFlag, StopFlag), and the subregions included in the identified regions (Start, Stop), the region name (Entity name) and the data type that the region belongs to. (b) The same information as in (a) is displayed in Html format with active links to the NCBI database.
