Prevalence of Human Papillomavirus Variants and Genetic Diversity in the L1 Gene and Long Control Region of HPV16, HPV31, and HPV58 Found in North-East Brazil

Table 1

Primers for HPV16, HPV31, and HPV58 L1 gene and LCR analysis.

HPV type	Region amplified	Sequence primer 5′-3′	Amplicon size
HPV16	L1	5′-ACGGTACCCAGGTGACTTTTATTTACATCC-3′	1500 pb
		5′-TAAGTCGACCAGCTTACGTTTTTTGC-3′
	LCR	5′-TTCTGCAGACCTAGATCAGTTTC-3′	1057 pb
		5′-GTGCATAACTGTGGTAACTTTCTGG-3′
HPV31	L1	5′-GATTCGAAAAAATGTCTCTGTGGC-3′	1550 pb
		5′-TAAGTCGACCTTTTTAGTTTTTTTACG-3′
	LCR	5′-TACCTCCAAAGGAAAAGGAAGACCC-3′	1152 pb
		5′-TTGGCACAAATCATGCAATGTTCG-3′
HPV58	L1	5′-AACCTGGTCCAGACATTGCATC-3′	1574 pb
		5′-CCACCAAACGCAAAAAGGTTA-3′
	LCR	5′-CATGTTCTATGTCCTTGTCAG-3′	1000 pb
		5′-TTGCCAGGTGTGGACTAA-3′