Prevalence of Human Papillomavirus Variants and Genetic Diversity in the L1 Gene and Long Control Region of HPV16, HPV31, and HPV58 Found in North-East Brazil

Table 2

Reference sequences used in phylogenetic analysis.

Reference sequences; (GeneBank accession number)	HPV type/lineage	References
K02718; AF536179; HQ644236; AF534061; AF536180; HQ644298; AF472509; HQ644257; AY686579; AF402678	HPV16/A; HPV16/A; HPV16/A; HPV16/A; HPV16/B; HPV16/B; HPV16/C; HPV16/D; HPV16/D; HPV16/D	(Burk et al., 2013) [7]
J04353; HQ537675; HQ537676; HQ537680; HQ537682; HQ537684; HQ537685	HPV31/A; HPV31/A; HPV31/B; HPV31/B; HPV31/C; HPV31/C; HPV31/C	(Burk et al., 2013) [7]
D90400; HQ537752; HQ537758; HQ537762; HQ537764; HQ537774; HQ537768; HQ537770	HPV58/A; HPV58/A; HPV58/A; HPV58/B; HPV58/B; HPV58/C; HPV58/D; HPV58/D	(Burk et al., 2013) [7]