Prevalence of Human Papillomavirus Variants and Genetic Diversity in the L1 Gene and Long Control Region of HPV16, HPV31, and HPV58 Found in North-East Brazil

Table 8

HPV58 LCR sequence variation with regard to the reference sequence D90400.1. The table also shows the transcriptional factor binding sites in the nucleotide altered.

Genome; position	Nucleotide; variation	Number of; isolates	Transcriptional; factor
7150	G/T	1/6
7169	Del TATACAT^*	1/6
7187	T/C	1/6
7188	T/A	1/6
7189	A/C	1/6
7189	Del A	1/6
7188	Del TATGT	1/6
7197	G/C	1/6
7202	C/T	1/6
7210	T/A	3/6
7233	G/A	1/6
7244	C/A	1/6	YY1
7268	C/G	1/6	YY1
7269	C/T	2/6	YY1
7283	Ins TGTCAGTTTCCT	1/6
7299	C/G	3/6
7319	A/G	1/6
7347	G/A	1/6	Oct-1, C/EBPbeta
7360	T/C	1/6	NF-1
7384	T/G	1/6	C/EBPbeta
7410	G/A	1/6
7436	G/A	1/6	Oct-1, C/EBPbeta
7444	T/G	1/6
7446	T/G	1/6
7450	A/G	1/6
7498	T/G	1/6
7537	T/C	2/6
7701	G/A	1/6
7729	A/C	1/6
7739	A/G	2/6
7745	C/A	3/6	NF-1
7760	G/C	1/6	AP-1
7760	A/G	1/6	AP-1
7793	T/C	1/6	E2
7794	A/G	3/6	E2

Del: deletion,Ins: insertion. ^*Novel HPV58 deletion.