aCGH-MAS: Analysis of aCGH by means of Multiagent System

Algorithm 1

Automatic selection of segments.

Input: CGHArrays, Groups

Output: RelevantSegments

foreach    do

 ;

 // Chi Squared test

 if  80% of the data from a ct > 5  then

  ;

  ;

  -value ;

 end

 // Fisher’s Exact test

 else

  -value ;

 end

 // H0: pathology and the segments are independents

 if  -value < 0.05  then

  ;

 end

end